Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2534 |
Symbol | |
ID | 5662927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3085187 |
End bp | 3085393 |
Gene Length | 207 bp |
Protein Length | 68 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641237160 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_001502389 |
Protein GI | 157962355 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.629108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGCG GAACTGTTAA ATGGTTCAAC AACGCCAAAG GATTCGGGTT TATATGCCCT GATGCTGGCG GTGAAGACGT TTTTGCACAC TATTCTACCA TTGAAATGGA AGGCTATCGA ACTCTAAAAG CAGGCCAACC AGTCAGTTTT GAAGTAGAAG CAGGTCCAAA AGGGATGCAC GCGTCAGCAA TATCGCCAAC AAACTGA
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Protein sequence | MASGTVKWFN NAKGFGFICP DAGGEDVFAH YSTIEMEGYR TLKAGQPVSF EVEAGPKGMH ASAISPTN
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