Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2528 |
Symbol | |
ID | 5662921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3079920 |
End bp | 3080396 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641237154 |
Product | 17 kDa surface antigen |
Protein accession | YP_001502383 |
Protein GI | 157962349 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3133] Outer membrane lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000371225 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAAAC ATCATCTTAT TGTTTTCACG GTTATCTGTT TATTTTTTGG TACGCAGAGC GTTTTTGCAG CGCCTTATGA TCGTAATCAG GCCGTGCCAG TCGAGAAAGT GGAGTTCGGT CAAGTGGTCT CGGTGCGTAA CATTACCCAA AAGCAGCTTG TCGAAGATCG CAACACAGGC TGGAAAACTT TTGGTGGTGC ACTGATTGGT GGCGTTATTG GTCATCAATT TGGTGGCGGT TCAGGTCAAG ATGTGGCCAC GGTTTTAGGG GCCTTACTAG GGGCTAGAGT CGGGAACACT TATGGTGACA GCTCCTATTA CCAAGAGTTA AAGCTAGTGG AGATGATGAT AGCCTTAGAC ACTGGCGAGC AGGTGATGGT GATTCAAGAT TTGGATCCCG GAATGATATT CAATGTCAAC GATGAGGTCA GGGTTGTCTA CTTACAAGGG TTTGTCAGGG TCGATCGTCA GATGTAG
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Protein sequence | MLKHHLIVFT VICLFFGTQS VFAAPYDRNQ AVPVEKVEFG QVVSVRNITQ KQLVEDRNTG WKTFGGALIG GVIGHQFGGG SGQDVATVLG ALLGARVGNT YGDSSYYQEL KLVEMMIALD TGEQVMVIQD LDPGMIFNVN DEVRVVYLQG FVRVDRQM
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