| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2520 |
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| Symbol | |
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| ID | 5662913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3071448 |
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| End bp | 3072668 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237146 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_001502375 |
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| Protein GI | 157962341 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAGAT GGCTAAAAAT TAAAACTGAT GGAATTCGCC CTATGAAGAA AGAAACCCAA
ATAGTCAGTC TTGGCCGCGA TAAGAAATGG ACCCAAGGGG TGATTAACCC GCCCGTTTAC
CGAGCTTCCA CCATGGTATT CGATACCATT GAAGATATGC GCTTTGCCGC AAAAAACAAG
GCAAATGGCG AGATGTTCTA TGGCCGCCGT GGCGGACCAA CACACTTTGC CTTTCAAGCA
GCCATCGCCG AATTAGAAGG CGGTGTGGGT ACGGCACTAT ATCCATCGGG TAGCGCCGCT
ATCAGCAACA GTTTGCTCTC TTTCTTAAAA TCAGGTGACC ACCTATTAAT GGTCGACAGT
GCCTACGAAC CAACTCGTGA CTTATGCGAT AAGTTACTGG CTGGCTACGG TATTGAGACG
ACCTATTACG ACCCAATGAT AGGTGATGAC ATCGAGGCGT TAATCCAACC TAACACTAAG
GTGTTATTTT TGGAGTCTCC AGGCTCTATC ACCATGGAAG TACAAGATGT ACCTACCCTG
AGTCGTATCG CCCACCAGCA CGATATCGTG GTCATGCTCG ACAATACTTG GGCGTCACCG
ATTAACTCTC GCCCATTTGA AATGGGCGTA GATATCTCTA TCCAAGCGGC GACAAAGTAT
ATTGTCGGCC ACTCAGATGT GATGATGGGC ACCGCCACCG CCAATGAAAA GCATTGGGAA
CAACTTAGAG AACATAGCTA CCTGCTTGGC CAGTGCACCT CTCCCGATGA TGTTTATCTT
GCCAGTCGCG GCCTGAGAAC CTTAGGTATT CGCTTAGCTC AGCATGAACA GAACGCACTT
AAAATAGCCA ATTGGCTAAA TAGCCGCCCA GAAGTCGATC ATCTGCGTCA CCCCGCTTTT
GAGTCTTGCC CCGGCCATGA ATTCTTTAAA CGCGACTTTA GTGCTTCAAA CGGTTTGTTC
TCATTTGTGT TAAAGCAAGG CGATGTTAGA TCGGTTACCG CGTTCGTTGA AAATATGAAG
CACTTTAAAA TGGGCTTCTC ATGGGGTGGA TATGAGAGCC TTATCTTAGG CGTTTTTGGC
ATCGACAAGC TGCGCACTGC AACTCAGTGG GACAGCAGTA AGCCTCTCAT ACGATTGCAT
ATTGGTCTTG AAAATGTGGA TGACTTAATC GCCGATCTCG ATGCAGCGTT TGAGCGTTAT
AATCAAGTCT TGAACCGTTA A
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| Protein sequence | MLRWLKIKTD GIRPMKKETQ IVSLGRDKKW TQGVINPPVY RASTMVFDTI EDMRFAAKNK
ANGEMFYGRR GGPTHFAFQA AIAELEGGVG TALYPSGSAA ISNSLLSFLK SGDHLLMVDS
AYEPTRDLCD KLLAGYGIET TYYDPMIGDD IEALIQPNTK VLFLESPGSI TMEVQDVPTL
SRIAHQHDIV VMLDNTWASP INSRPFEMGV DISIQAATKY IVGHSDVMMG TATANEKHWE
QLREHSYLLG QCTSPDDVYL ASRGLRTLGI RLAQHEQNAL KIANWLNSRP EVDHLRHPAF
ESCPGHEFFK RDFSASNGLF SFVLKQGDVR SVTAFVENMK HFKMGFSWGG YESLILGVFG
IDKLRTATQW DSSKPLIRLH IGLENVDDLI ADLDAAFERY NQVLNR
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