| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2514 |
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| Symbol | |
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| ID | 5662907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3063013 |
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| End bp | 3064038 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237140 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001502369 |
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| Protein GI | 157962335 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.39605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAACC CACTGCTAAG GGAATCGGCA ACAAAGTTAA AAAAAGCCAT TCCTTTGATG
CTAAAACATC AGATCCCGAC AACGCCAACC AACTATGCGC TTTGGTATGC TTACGTCGGT
GAAAAAAGCC CAAATCTTAA CCAGCGCTTA GACGAAATTG TCAGCCAATA TAGCACCTGT
CCACCAAGCC ATAGCGAGCG GCTATATCAA GAGTATCTAG CCGATCCAGC TGCGCTAAAT
GTGGTCGATA TGCGACTTAA TCTCGATGCT ATGGTGACAG AGCTTTCGCA ATCATTGAAA
GATACCAACC TTGATGCCAG CCAGTTCCAT AACAAGATAA GTAGCAACTA CAACAAGCTT
AACAAAATTG AGAATGACGG CTTTACCATT GAAGAAGTGC TAACTGTTGT CAAAAGTCTA
GTTCAGGACT CCAATGACAT TCGCATGAGC GCACAGCATT TCTCTGCTCA GCTGGCTAAA
GCGCAATCAG AAATTGATGC CCTAAAGCAA CAGTTAAAGC AGTCAGAGCA TGAGATGCAT
TATGATGCAC TAACCAGCTC GCTTAATCGC CGTGCATTCG ATAATGATCT AAAAGGCATT
TTGCAACAGC ATCCACAAGG TCTCTGTCTG ATAATTGCCG ATATCGATCA CTTTAAAGTC
TTTAACGATA CCTACGGCCA CCAGCTCGGC GACCAAGTAC TTAAAGCCGT GACTAAACGC
CTTACGGAAG CCTGTAAAGA CGGCACTAAA CTATATCGCT TTGGCGGCGA AGAATTTGCT
CTTATCGTGC CTAAGAGCGA ATTACGACGC GCTCGCCAAC TGGCAGAGTC AATGCGCCGT
AGCTTGGAAA AGCTCACCTT AAAAGATAAA CGTAAAGGCG AGACGATTAA CAACATCAGC
GCTTCTTTTG GGGTCGCCGA ATATCAAACA GATGATACCA ATATCGCATT AATTGATCGC
GCCGACAGCC AGCTGTATCA GGCTAAGAAC CTTGGCCGCA ACCGAGTCAT GCCGATAATA
CGTTAG
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| Protein sequence | MANPLLRESA TKLKKAIPLM LKHQIPTTPT NYALWYAYVG EKSPNLNQRL DEIVSQYSTC
PPSHSERLYQ EYLADPAALN VVDMRLNLDA MVTELSQSLK DTNLDASQFH NKISSNYNKL
NKIENDGFTI EEVLTVVKSL VQDSNDIRMS AQHFSAQLAK AQSEIDALKQ QLKQSEHEMH
YDALTSSLNR RAFDNDLKGI LQQHPQGLCL IIADIDHFKV FNDTYGHQLG DQVLKAVTKR
LTEACKDGTK LYRFGGEEFA LIVPKSELRR ARQLAESMRR SLEKLTLKDK RKGETINNIS
ASFGVAEYQT DDTNIALIDR ADSQLYQAKN LGRNRVMPII R
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