| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2504 |
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| Symbol | |
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| ID | 5662897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3049646 |
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| End bp | 3052900 |
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| Gene Length | 3255 bp |
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| Protein Length | 1084 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237130 |
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| Product | ribonuclease |
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| Protein accession | YP_001502359 |
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| Protein GI | 157962325 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGGA TGTTAATCAA TGCGACTCAA TCTGAAGAGT TGCGCGTAGC CCTTGTTGAT
GGGCAACAAC TTTATGATCT GGATATCGAA AGCCCAGGCC ATGAACAAAA GAAAGCCAAC
ATTTACAAAG GCACAATTAC ACGAGTAGAA CCGTCTCTTG AAGCGGCTTT CGTTGATTAT
GGTGCTGAGC GTCACGGCTT CCTACCACTT AAAGAAATCG CTCGAGAATA CTTCCCTAAA
GGTTACTCTT TCCAAGGCCG TCCTAACATT AAGGAAGTGG TTAAAGAAGG CCAAGAAGTT
ATTATCCAGA TTGATAAAGA GGAACGTGGC AACAAAGGTG CTGCACTAAC TACTTTTATT
AGTCTTGCAG GTTCTTACCT AGTTCTAATG CCAAATAACC CTCGTGCAGG TGGTATTTCA
CGTCGTATCG AAGGTGATGA GCGTACAGAG CTTAAAGCCG CTCTTGCCGA GCTTGAAGTG
CCACAGGGTA TGGGTCTAAT TGTTCGCACC GCTGGTGTGG GTAAGGATCC AGCCGAATTG
AAGTGGGACT TAAAGGTACT TCAACACCAC TGGGCTGCAA TTAAAGAAGC AGCAGAAGGT
GCACCAGCTC CTTTCCTAAT TCATCAAGAA AGTAACGTAA TTGTTCGTGC TATTCGTGAC
TATTTACGTC GCGACGTTGG TGAGATATTA ATTGACCACC CACGCATTTA TGAACAAGCA
AAAGAGCACG TTTCTCTTGT TCGTCCAGAC TTTGTTGAAC GTATTAAGCG CTATGACGCT
GAAGTACCAC TATTTACACA TTACCAGATC GAAACACAAA TCGAATCTGC GTTCCAACGT
GAAGTGCGCC TTCCTTCTGG TGGTTCAATC GTAATCGACC CGACAGAAGC CCTAACCTCT
ATCGATATTA ACTCTGCCCG TGCAACTAAA GGCGGCGATA TCGAAGAGAC AGCACTGAAT
ACAAACCTTG AAGCGGCAGA CGAAATTGCT CGTCAATTGC GTCTTCGTGA CTTAGGCGGT
TTGGTTGTTA TCGACTTTAT CGATATGACG CCTGTGCGCC ATCAACGTGA AGTTGAAAAA
CGTATGCAAG ACGCCGTTCA TCATGACCGC GCTCGCGTAC AATTAGGTCG TATTTCACGC
TTTGGCTTGA TGGAAATGTC GCGTCAGCGC CTACGTCCTT CGCTAGAAGA GTCTGCTGCG
CACCTATGCC CTCGCTGTCA TGGACAAGGT ACTATTCGTG GTACAGAGTC TCTAGCACTA
TCTATTCTTC GTCTAATGGA AGAAGAAGCA ATTAAAGAGA ACACATCGCA AATTGAAGCG
GTTGTTCCTG TTGATGTTGC CGCTTTCCTA CTTAACGAAA AGCGTAAAGC GATTCGCATC
ACTGAAAAGC GTCATAACGT TGAAGTGTAT GTCATTCCAG ATCCAAATAT GACAACACCA
GATTACCGTG TTGTTCGTCA TCGTAAAGAT GATGAGATCA GTGAATCTAG CTACAAGTTA
CTTGAGAAAG AAGAGTCTAA GCTATACGAA CCACGTAAGC TTGAAAGAGC TGCCGCTCCA
CAGCCAGCAC TAAAAGGTTT CTCTACGCCA AAGAAAGCGC CAGTAGTTGA AACTAAACCT
GCTGCACCAA AGAAAGAAGA GCCAGGTTTC TTCGCTAAAA TTGCTGCAGC AATTAGCTCA
CTATTTGGCT CAAAAGAAGA ACCAAAAGCT GAAACTAAGA AGCAAGATAA AGACAGTCGC
GGTAATCAAG GCCGCACAAA TAACCGTCGT AATAGCAATC GTCGCAATGA CCCTCGCCGT
AATCGCAACG AAAATCGCAG CGATAACCGA AACGATAGCC GCAATGACAG CGAACAAGCT
AAAGACAAGC GTAGCAAGAA CAGTCGCAGC GATAAAAGCG ATGACCGTTC ACAGGCTCAG
GAAGACACGA GTAAGCGTCA ACCGCGTGCC GATAAGCCAC GCTCTCGTCA AGAGGCTAGC
AACGAGAACG AGCAACCAAA GCAAGAAGCT GCACGTGAGC GTCGCCAGCG TCGTAACATG
CGCCGTAAAG TGCGTGTGAC TAACGAGACT GAAGAAACCA AAGCGGTAGC CGCTAAAGTT
GATACTCCGG TACCAACTAG TGTGACTAAC GAAGACAAAC CTGCACGTCC AAAGCGTCAA
CCTCGTAAGC CTAAGGCTAA AGTTGAAGCG GTTGAAGCTG CAGAACAAAC TGAAGTAGTG
AGTCAGGTTG AAGCCATTGT AGAAACACCT GTTGAAGTGC CTACGCCAGT TGTTGAAACG
CCGAAGCCTG TTGTTGAAAC TACAGCAGAT GCTGTGACAG AAGAAAATGT AGCTTCAACT
GAAGAAACTA CTTCCGAAGA TAATACTCGT GAGCCACGTG AAGGCCAACG TAGAAGCCGT
CGTAGTCCTC GCCACTTACG TGCAGCGGGC CAACGCCGTC GTCGTGATGG AGACGCTGCT
CAGCAAAATG AAGATAACCA AGCATTTGTT GCGATAGATC CTGTCACAAC TGTTGTTGAA
AGCACTTCTG ACGTTGTCGT TGTTGCACCA ACTGAGGCTA ATGTTGAAGT TAAAACTGAT
ACAATAGCTG ATGTTCAAGT CGTAGCTAAA GCCGAGTCGA CCAGCGAAGC TCAGTCTCCT
GTTGTTGCCC CGACTGAGGC GATTGCTGTT GAAGCCACAC CTGTTAAAGC TGAGATCGCT
GCAGAAGCCC CAGTAGCTAA GCCTGAAGTT GAAGCTAAAC CTGTAGTTGA GCCGATAGTT
GAAGCTAAGC CAGTGGTTGA GCCGATAGTT GAAGCTAAGC CAGTGGTTGA ACCAACAGTT
GAAGCTAAGC CTGCGGTTGA GCCGACAGTC GAAGCTAAGC CTGTGGTTGA GCCGACAGTT
GAAGTCAAGG CTAAGCCGAG CGAACCTAAA GCACAAAAAG TTGAATCAGC GTCAAAAACA
GCTTCTGCTC CAATGGCAAA ACCTGCAGCA ATCACGCCTA ATGTCGAGAA ATCGGTAGAA
GTGCCAGCTC AAGTTGTTGA AGCGAAGGTT ACAGAGCCTA AGCTTGCTGA AGTCGCTGTC
GAAGCCAAGC CTGTTGCTGC CAAACCTGCT AGTCGCTTTG GCTCGATGGT AATGTCAGAT
ACGACCAAGC CAACAGTTGA AAACAGAGAG AATATTGCTA CACCTATGGG TCGCCAATAT
TCAGCCTCAG AGTCAGCTGA AGCAACTAAG CCTAGAACGG CAAACAGTGC TAATTCAGAA
ACAGTTCGTA CTTAA
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| Protein sequence | MKRMLINATQ SEELRVALVD GQQLYDLDIE SPGHEQKKAN IYKGTITRVE PSLEAAFVDY
GAERHGFLPL KEIAREYFPK GYSFQGRPNI KEVVKEGQEV IIQIDKEERG NKGAALTTFI
SLAGSYLVLM PNNPRAGGIS RRIEGDERTE LKAALAELEV PQGMGLIVRT AGVGKDPAEL
KWDLKVLQHH WAAIKEAAEG APAPFLIHQE SNVIVRAIRD YLRRDVGEIL IDHPRIYEQA
KEHVSLVRPD FVERIKRYDA EVPLFTHYQI ETQIESAFQR EVRLPSGGSI VIDPTEALTS
IDINSARATK GGDIEETALN TNLEAADEIA RQLRLRDLGG LVVIDFIDMT PVRHQREVEK
RMQDAVHHDR ARVQLGRISR FGLMEMSRQR LRPSLEESAA HLCPRCHGQG TIRGTESLAL
SILRLMEEEA IKENTSQIEA VVPVDVAAFL LNEKRKAIRI TEKRHNVEVY VIPDPNMTTP
DYRVVRHRKD DEISESSYKL LEKEESKLYE PRKLERAAAP QPALKGFSTP KKAPVVETKP
AAPKKEEPGF FAKIAAAISS LFGSKEEPKA ETKKQDKDSR GNQGRTNNRR NSNRRNDPRR
NRNENRSDNR NDSRNDSEQA KDKRSKNSRS DKSDDRSQAQ EDTSKRQPRA DKPRSRQEAS
NENEQPKQEA ARERRQRRNM RRKVRVTNET EETKAVAAKV DTPVPTSVTN EDKPARPKRQ
PRKPKAKVEA VEAAEQTEVV SQVEAIVETP VEVPTPVVET PKPVVETTAD AVTEENVAST
EETTSEDNTR EPREGQRRSR RSPRHLRAAG QRRRRDGDAA QQNEDNQAFV AIDPVTTVVE
STSDVVVVAP TEANVEVKTD TIADVQVVAK AESTSEAQSP VVAPTEAIAV EATPVKAEIA
AEAPVAKPEV EAKPVVEPIV EAKPVVEPIV EAKPVVEPTV EAKPAVEPTV EAKPVVEPTV
EVKAKPSEPK AQKVESASKT ASAPMAKPAA ITPNVEKSVE VPAQVVEAKV TEPKLAEVAV
EAKPVAAKPA SRFGSMVMSD TTKPTVENRE NIATPMGRQY SASESAEATK PRTANSANSE
TVRT
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