| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2488 |
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| Symbol | |
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| ID | 5662881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3034712 |
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| End bp | 3035602 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641237114 |
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| Product | cytidine deaminase |
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| Protein accession | YP_001502343 |
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| Protein GI | 157962309 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01355] cytidine deaminase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGACC GGTTCTTAAA AAGCATAGCT AAGTTACCAG AGCCACTAGC AACCGCTATC
GTACCATTGC TCGATAAAGA CTTTGCTGGC CATATCGATG CTCAGCAGTT AGCAGAGCTA
CAAGCAGCAA GCAAGATGGA GCTAAACGAA CTACTTTTAG CCCTGCTTCC CATTGCAGCC
GCTTTAGCCA GACCGCCGAT TAGTCAGTTT CATGTAGGGG CTATCGCTAA AGGTAAAAGC
GGTGATATCT ATATGGGCGC GAATATTGAA TTGCCAGGTG AAGCGCTTTT TCATTCCGTA
CATGCTGAGC AGAGCGCCAT TAGCCACGCA TGGTTAAGCG GCGAAAGCAT TATTGAAGAC
ATCATAGTCA ATGCCTCACC TTGCGGCCAT TGTCGTCAAT TTATCAATGA GCTCGTTGAC
GGTGGTAAAG TTAACATTCA CTTACCTGAC CAAGCCACTG CGCCGCTTTC TCACTACTTG
CCTTATGCAT TCGGCCCAAG CGATCTTGAT GTCACTGAGC CTTTGCTTTC AAAACAGCAG
CAGACGCTGA CATTAGATTC TAACGACCCG ATGATCATCG AAGGGTTAGA TCATGCAGGA
CTAAGCTATG CGCCTTACAC TAAAGCCTAT GCTTCTGTCG TTTTAGAGAC TAAAGATGGT
GCGACATACT GTGGACGCTA CGCCGAGAAC GCTGCGTTTA ACCCATCAAT GCAACCCATG
CAAATGGCGT TATCGACCAT GGCGCGTCAT AACCGCGATT TCAGCGAAAT TAATCGCGCG
GTGTTGATTG AGTCTTCTAA AGGGGTGATA TCGTTGGTAG GCGCGGCTAT GGACGCCCTG
CACAGTGTTG CAGCTGTTGA GCTTGAACAT ATTGTGGTTG AGCCAGAGTA A
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| Protein sequence | MQDRFLKSIA KLPEPLATAI VPLLDKDFAG HIDAQQLAEL QAASKMELNE LLLALLPIAA
ALARPPISQF HVGAIAKGKS GDIYMGANIE LPGEALFHSV HAEQSAISHA WLSGESIIED
IIVNASPCGH CRQFINELVD GGKVNIHLPD QATAPLSHYL PYAFGPSDLD VTEPLLSKQQ
QTLTLDSNDP MIIEGLDHAG LSYAPYTKAY ASVVLETKDG ATYCGRYAEN AAFNPSMQPM
QMALSTMARH NRDFSEINRA VLIESSKGVI SLVGAAMDAL HSVAAVELEH IVVEPE
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