| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2478 |
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| Symbol | |
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| ID | 5662871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3022869 |
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| End bp | 3023798 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641237104 |
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| Product | agmatinase |
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| Protein accession | YP_001502333 |
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| Protein GI | 157962299 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
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| TIGRFAM ID | [TIGR01230] agmatinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00187058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCACTA TTGCAGATAA GCCTGATTAT TCGCTTTATT CAAATGCATT TGGTTACTTA
AGACAGCCGC TAGACTTCAA ACCATTAGAA GGCGATGCGG ATGTTGTAGT GTTAGGCTTA
CCTTTTGATA TGGCTACTAC GGGTCGCTCT GGTGGACGTA TGGGCCCAGG TGCAATTCGT
AATGCTTCAG TAAACCTGGC TTGGGAAGAA ACTCGCTGGC CTTATCAGTT TAAACTAAGC
GAGCATGTTA AAATCGTCGA TGCAGGCGAT CTCGTTTATA ACTGTGGTGA TTCTGCAGAC
TTCACACAGC GTGTTGAAGA TTTCGCAACT AAGATCTTAG AAGCTGATAA GGCTATGCTA
AGTTTTGGTG GCGATCACTT TGTGACTTTG CCCCTGCTAC GTGCTCACTA TAAGAAGCAC
GGTAAGATGG CGCTATTGCA CTTTGATGCA CATACCGACA CTTATAGCCA AGGTAGTAAG
TATGATCACG GCACCATGTT TTATCATGCG CCAAACGAAG GGATCATTGC TGCAGAGAAC
TCAATTCAAG TCGGTATCCG TACTGAATAC GATACTTCCA ATCATCTTTT CAAAGTTATC
GATGCGGCGG CAGCTAATGA AATGACTGCT GATGAGATCG TTGCACAAAT TCGTGAACGT
GTTGGCGATA TGCCGCTATA CGTGACTTTC GATATTGACT GTTTAGACCC AGCTTTCGCT
CCTGGCACAG GTACGCCAGT ATGTGGCGGT TTGACCAGTG ACAAGGCGAT GAAAATCATT
CGTGGTTTAA AAGGCATGAA GATTGTGGGT ATGGACGTGG TTGAAGTGGC ACCAGCCTAC
GACAGCGCAG AGATCACTGC TTTAGCGGGT GCTACTTTGG GCCTAGAGAT GTTGCACGTT
TGGGCTGAGT CTAACGGCAA GATCAAATAA
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| Protein sequence | MTTIADKPDY SLYSNAFGYL RQPLDFKPLE GDADVVVLGL PFDMATTGRS GGRMGPGAIR
NASVNLAWEE TRWPYQFKLS EHVKIVDAGD LVYNCGDSAD FTQRVEDFAT KILEADKAML
SFGGDHFVTL PLLRAHYKKH GKMALLHFDA HTDTYSQGSK YDHGTMFYHA PNEGIIAAEN
SIQVGIRTEY DTSNHLFKVI DAAAANEMTA DEIVAQIRER VGDMPLYVTF DIDCLDPAFA
PGTGTPVCGG LTSDKAMKII RGLKGMKIVG MDVVEVAPAY DSAEITALAG ATLGLEMLHV
WAESNGKIK
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