Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2469 |
Symbol | pheT |
ID | 5662862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3010939 |
End bp | 3013326 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641237095 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_001502324 |
Protein GI | 157962290 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.228112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA GTGAATCTTG GCTTCGTGAG TGGGTTAACC CAAGCGTTAA TCGTGAAGAG TTAGCACACC AAATTACTAT GGCCGGTCTT GAAGTTGACG GCATTGAGCC AGTAGCTGCC GAGTTTAGCG GTGTAGTTGT CGGTGAAGTC GTTGAGTGTG GCCAGCATCC AGATGCAGAC AAATTACGCG TAACTAAAAT CAATGTCGGC GGCGAAGAGC TAATCGACAT CGTATGTGGT GCGTCAAACT GTCGTCTAGG TCTTAAGGTT GCAGTCGCTA TGGTTGGCGC TGTGCTACCA GGTGATTTCA AAATCAAAAA AGCCAAACTA CGTGGACAGC CATCATTTGG TATGTTGTGC TCATTTGGCG AGCTTGGTGT AGATATTGAA AGTGACGGCA TTATTGAATT GCCACTTGAC GCACCTGTTG GCCAAGACGT ACGTGAATTC TTAGATCTAA ACGATGCCAT TATTGATGTC GATTTAACGG CTAACCGTGC AGATTGTCTA GGTATGGCAG GTCTTGCTCG TGAAGTAGGC GTGTTAAACC GTCAATCGGT TACTGAACCG ACTTGGGATG CGGTTGAAGC GACAATTGCT GATGCAGTTA CCGTTGATAT TCAAGAACCT CAAGAGTGTG GTCGTTACTT AGGCCGCGTT ATCAAGAATG TTAACGTTAA GGCTGAATCA CCACTATGGA TGCAAGAGAA ATTGCGTCGT AGCGGTATCC GCTCTATCGA TCCTATCGTC GATATTACTA ACTATGTATT GATTGAGTTT GGTCAACCAA TGCACGCATT TGACTTAGCT AAGTTAGATG GCGGTATTGT GGTTCGTAAG CCCAACGGCG AAGAGAAACT GACTCTACTT GATGGCAATG AAATCACTAT TCCTGAAGGT ATGTTGATCA TTGCTGACCA CGCTAAGCCA TTGGCTCTAG CGGGTGTATT TGGTGGTGAG CACAGCGGTG TGACCACAGA AACCACTGAT ATCGTACTTG AGTGCGCTTA CTTTGCACCG CTAGCTATCT TAGGCAAGGC ACGTAAGATT GGTCTGCATA CTGATGCATC ACACCGTTTC GAACGTGGTG TTGACCCAGA GCTACAACAG AAGGTTATGG ATCGTGCTAG TCGTTTAGTG CTAGAGATCT GTGGTGGTGA AGCTGGCCCA GTTGTTGAAG CAAAGTCTGA AGAGAATCTA CCTAAGCCTG TACAGATCGT ATTGCGCCGT AGCAAGCTAG ATAAGACTTT GGGTCATCAT ATTGATGATG CTGAAGTTAA AGAAATTCTA GAGCGTTTAG GTTTCATCGT CGTAGTGAGT GAAGGGCTGT GGAATGTAAC CACGGCAACT TACCGCTTCG ATATGGCAAT AGAAGAAGAC TTGATTGAAG AAGTTGCCCG TATTTACGGT TACAACAACA TTCCAAATAT CGCGCCTATT GCTCATTTAA GCATGTCTGA CCATAAAGAG TCGAACATCA ACATTAAGCG TGTTCGTAGC ATGCTGGTTG CTCGAGGTTT CCAAGAAGCT GTGACTTATA GCTTTGTGGA TCCGAAGCAG CAAGAGTTGA TTCACCCAGG TGCAGAGGCG ATGATTCTAC CGAATCCAAT TTCGGTTGAA ATGTCTGCTA TGCGTCTGTC TATGTTCACC GGTCTTTTGA CTGCAGTTGG TTATAACCAA AGCCGTCAGC AAAACCGTGT CAGACTGTTC GAAACAGGTC TACGTTTTGT ACCAAATGAA ACAGCAGAGT CTGGTGTGTC ACAACAACCT ATGCTTGCTG CTGTTATTGC CGGTAACCAA AATGACGAGC ATTGGACAAT GGAGTCAAAA ACCGTTGACT TCTTTGACCT AAAAGGTGAC TTAGAAGCAG TCATCGGTTT GACTGTTGCT GATGCTGAAT TTAGTTTCAG ACCAGCAACT CATCCAGCGT TACATCCGGG GCAATGTGCT GAAATCTTAA GAGATGATCG CGTTATTGGT ATCATAGGTA CGGTTCACCC AAGCCTAGAG AAGCCATTTG GCCTAAACGG AAAAACAATT ATTTTCGAGC TAGAATTAGA CGCTTTATTG CACGCTAATT TGCCGCTAGC CCAGACTGTA TCTAAGTTTC CAGCTAACCG CCGTGATATC GCCATCGTAG TTGATGACGC TATTGCAGCG AATGATGTTG TAAAAATGAT AAGAAAAGTT GGCGAAAATC AGTTGGTTGG CATAAACTTG TTCGATGTAT ACCGAGGTAA AGGTGTAGAG GAAGGCAAAA AGAGCCTTGC AATAGCACTC TTATTACAAG ACAACGCTCG TACACTGGAA GAAAAAGAAA TCGCTGAGAT GGTAGACGTC GTGGTTTCTG CTCTGAAAGA CGAGTTCAAC GCATCGTTGA GGGACTAA
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Protein sequence | MKFSESWLRE WVNPSVNREE LAHQITMAGL EVDGIEPVAA EFSGVVVGEV VECGQHPDAD KLRVTKINVG GEELIDIVCG ASNCRLGLKV AVAMVGAVLP GDFKIKKAKL RGQPSFGMLC SFGELGVDIE SDGIIELPLD APVGQDVREF LDLNDAIIDV DLTANRADCL GMAGLAREVG VLNRQSVTEP TWDAVEATIA DAVTVDIQEP QECGRYLGRV IKNVNVKAES PLWMQEKLRR SGIRSIDPIV DITNYVLIEF GQPMHAFDLA KLDGGIVVRK PNGEEKLTLL DGNEITIPEG MLIIADHAKP LALAGVFGGE HSGVTTETTD IVLECAYFAP LAILGKARKI GLHTDASHRF ERGVDPELQQ KVMDRASRLV LEICGGEAGP VVEAKSEENL PKPVQIVLRR SKLDKTLGHH IDDAEVKEIL ERLGFIVVVS EGLWNVTTAT YRFDMAIEED LIEEVARIYG YNNIPNIAPI AHLSMSDHKE SNINIKRVRS MLVARGFQEA VTYSFVDPKQ QELIHPGAEA MILPNPISVE MSAMRLSMFT GLLTAVGYNQ SRQQNRVRLF ETGLRFVPNE TAESGVSQQP MLAAVIAGNQ NDEHWTMESK TVDFFDLKGD LEAVIGLTVA DAEFSFRPAT HPALHPGQCA EILRDDRVIG IIGTVHPSLE KPFGLNGKTI IFELELDALL HANLPLAQTV SKFPANRRDI AIVVDDAIAA NDVVKMIRKV GENQLVGINL FDVYRGKGVE EGKKSLAIAL LLQDNARTLE EKEIAEMVDV VVSALKDEFN ASLRD
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