Gene Spea_2459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2459 
Symbol 
ID5662852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3002843 
End bp3003937 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content47% 
IMG OID641237085 
Productimidazole glycerol-phosphate dehydratase/histidinol phosphatase 
Protein accessionYP_001502314 
Protein GI157962280 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0131] Imidazoleglycerol-phosphate dehydratase
[COG0241] Histidinol phosphatase and related phosphatases 
TIGRFAM ID[TIGR01261] histidinol-phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAGA AAATTTTATT TATCGACCGT GATGGCACCC TAATCGAAGA GCCAGTTACA 
GATAAACAAG TCGATAGTCT AGCTAAACTC GTGTTTGAGC CAAATGTGAT CCCTGCGCTA
TTAAAGCTGC AGAATGCAGG TTACAGACTG GTCATGATCA GTAATCAGGA TGGTCTTGGT
ACGCCTTCTT TCCCAAAAGA TGATTTTGAC GCGCCGCAAG ATATGATGAT GCAGATCTTA
AATAGCCAAG GTGTGTTATT TGATGACGTG CTTATCTGCC CACACTTTGA TGATGAAAAC
TGTAGCTGCC GTAAACCTAA GCTTGGCCTA GTTAAAGGTT ACCTGACTTC TGGCAAGATA
GACTTTACCC AGTCAGCCGT GATTGGCGAT CGTGAAACTG ACCTTGGCCT TGCAGATTCA
ATGGGCATAT TAGGGCTGCA ATACCACCCT GAGACGCTTA ATTGGAACGC TATTGCCGCT
AAGTTGCTGA ACAAGAACCG CTGCGCAACT GTCACTCGCA CCACTAAAGA AACCGATATC
CGCGTCACTG TTGATTTAGA CGCCGCAGAT AAAGGTGCGA TCAACACAGG CATAGGTTTC
TTTGACCATA TGCTGGAACA GATCTCGACA CACGGTAATT TCAAGCTAGA TGTTCAGGTC
GATGGCGACT TAGAGATTGA CGATCACCAC AGTGTTGAAG ATACGGCGCT CGCTATCGGT
GATGCATTGC GACAAGCCCT TGGTGATAAA CGCGGCATTG CACGCTTTGG TAACTCACTA
CCTAATGATG TATTCCAGCA GGCAATTCCT ATGGATGAAG CCAGTGCTAG CTGTCTATTA
GACTTATCTG GCCGTCCTTT TATCAAGTTT GACGGCGAGT TTGACCGTGA GCTTGTGGGG
CAGCTGTCTA CTGAAATGGT GCCGCACTTC TTCCGCTCAT TCGCCGATGG CCTACGCTGC
ACCCTACACA TCAGCACTCA AGGTGATAAT GATCACCACA AGGTTGAGAG CTTATTTAAA
GTCCTTGGTC GTACTCTTCG ACAAGCAGTA GCGATAGAAG GTGATGCGCT GCCATCAAGT
AAAGGTGTGT TATGA
 
Protein sequence
MKQKILFIDR DGTLIEEPVT DKQVDSLAKL VFEPNVIPAL LKLQNAGYRL VMISNQDGLG 
TPSFPKDDFD APQDMMMQIL NSQGVLFDDV LICPHFDDEN CSCRKPKLGL VKGYLTSGKI
DFTQSAVIGD RETDLGLADS MGILGLQYHP ETLNWNAIAA KLLNKNRCAT VTRTTKETDI
RVTVDLDAAD KGAINTGIGF FDHMLEQIST HGNFKLDVQV DGDLEIDDHH SVEDTALAIG
DALRQALGDK RGIARFGNSL PNDVFQQAIP MDEASASCLL DLSGRPFIKF DGEFDRELVG
QLSTEMVPHF FRSFADGLRC TLHISTQGDN DHHKVESLFK VLGRTLRQAV AIEGDALPSS
KGVL