Gene Spea_2458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2458 
Symbol 
ID5662851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp3001700 
End bp3002755 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content47% 
IMG OID641237084 
Producthistidinol-phosphate aminotransferase 
Protein accessionYP_001502313 
Protein GI157962279 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACTG CAACTAACGG CTTGAACTTA GCTCAACGCC TAGCCAGACC TGAATTGCTC 
GATCTACAGA TCTATCAATC GGCAAGGCGT ATTGGCGGTC AAGGTGATAT CTGGATCAAT 
GCAAACGAGT CGCCATTTAA TAATAGTGAA CTTGAAGGGC TGAACCGCTA CCCGGAATGT 
CAGCCTCCAG AACTTGTTAA TGCCTATAGC AACTACAGCA AGGTCGCAAC TGACAGCATC 
ATTACGAGTC GCGGCGCCGA TGAGGCGATT GAGTTACTGA TCCGTGCTTT TTGTATACCA 
GCCAAAGACT GTATCGCCAC TTTTGGCCCA ACTTATGGCA TGTACGCCAT CAGCGCGAAA 
ACCTTTAATG TTGGGGTGAA AGCGTTATCA CTAACCGAAG ATTTTCAGCT ACCCAGTGAT 
TACCTTTCTC AAGTAAGCGG CGCCAAGTTG GTATTTATCT GCAACCCTAA TAATCCAACG 
GGTAGCGTTA TAGCGCGGGA TAAGGTGATT GAAGTTATCA ACAACTGTCA AGATGCTATT 
GTGGTTGTGG ATGAGGCTTA TATCGAATTT AGCCCCGAAT TCAGCGTCGC CGATTTAGTC 
GCGACTTTCC CCAACCTTGT GGTTCTGCGC ACTCTGTCGA AAGCTTTTGC ATTGGCGGGA 
GCGCGGTGCG GTTTTTTACT GGCTAACCCT AATATTGTTG ATATCTGCAT GCGAGTTATC 
GCTCCCTACC CTGTGCCTCT TCCTGTCAGT CTTGTGGCTG AAAAGGCGCT TAGCACATCA 
GGACTTGAAA CCATGAGCCG ACAAGTCAAT GACATGAAGC AGCAGGGATT AAGGTTAGCG 
AATGCATTAC AGCGCTATGG TGCCAAGGTC GTAAAGGCAC ACGGTAACTA TGTACTTGCC 
GAGTTTGCAG ATAAACAACA GGTTCAGCAA AAGCTATCGC AAGCGGGAGT TATCGCCAGA 
AGTTATAGCG ACCCGCGCCT TAGCCAAGCA ATTCGATTTA GCTTTACTAA TCAAGCACAA 
ACAGACTATC TCATTCAACT GTTTCAACAA AAATAA
 
Protein sequence
MNTATNGLNL AQRLARPELL DLQIYQSARR IGGQGDIWIN ANESPFNNSE LEGLNRYPEC 
QPPELVNAYS NYSKVATDSI ITSRGADEAI ELLIRAFCIP AKDCIATFGP TYGMYAISAK 
TFNVGVKALS LTEDFQLPSD YLSQVSGAKL VFICNPNNPT GSVIARDKVI EVINNCQDAI 
VVVDEAYIEF SPEFSVADLV ATFPNLVVLR TLSKAFALAG ARCGFLLANP NIVDICMRVI 
APYPVPLPVS LVAEKALSTS GLETMSRQVN DMKQQGLRLA NALQRYGAKV VKAHGNYVLA 
EFADKQQVQQ KLSQAGVIAR SYSDPRLSQA IRFSFTNQAQ TDYLIQLFQQ K