Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2457 |
Symbol | hisD |
ID | 5662850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3000375 |
End bp | 3001703 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641237083 |
Product | histidinol dehydrogenase |
Protein accession | YP_001502312 |
Protein GI | 157962278 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0141] Histidinol dehydrogenase |
TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGATCC TCAACTGGCA ATCACTCTCA CCACAAGCGC AATTAGCGGC GCTGAAACGC TCGCCATTAA TTGGTGACAA CAGCCTTGAG CAAAATGTAG CGAGGATCAT CGAAGCCGTT GTAGCTAACG GCGATCAGGC GCTAAAGGAC TTTAACCGTG AGTTCGATGG GGTAAACCTA GAAACGCTAA AGCTAACGAC TACACAAATT GAGCAGAGCT GTAAACTGGT GCCTGAAAGT CTAAAACAGG CTATCGCTCA GGCTAAAAAC AACATAGAGC GGTTTCACCA GGCGCAGTTA CAGCCAAAAG TTGATATCGA GACTCAGGCA GGCATCCGCT GTGAGCTTCG CTCCGAGCCT ATTGAGCGTG TCGGACTCTA TATCCCTGGT GGCACGGCGC CGCTTATATC AACCGTACTC ATGTTAGCCC TACCGGCAAA AATTGCTGGC TGTAACAAAC GCGTTCTAGT GAGCCCACCA CCGATTAATG ACGCTATCAT TTATGCGGCA AATGAGTGTG GCATTGAAGA GATCTATCAG GTCGGTGGCG CGCAAGCTAT TGCTGCATTA GCCTTCGGCA CAGAGTCTCT GCCACAGGTA GATAAAATTT TTGGCCCCGG AAATCGTTTT GTCACCGAAG CAAAGCGTGC CGTCAGCCAA GATAATCGCT GCACAGTGAG TATCGATATG CCTGCGGGCC CATCAGAAGT ACTGATTATT GCCGATGGCC AAGCCAATGC TGAATTTGTC GCCGCCGATC TGTTATCTCA AGCTGAACAC GGTGCTGACT CACAGGTCAT GCTAGTCACC GACTCAACTG AGCTCGCAGA AGCGGTCAAC ACAGCCCTTG CTAATCAGCT TAAGCAGTTA TCGCGCACTG AGATAGCGAC GACAGCACTT AAGAGTAGTC GTACTTTGAT TGTTGATGAT ATACAGATGG CGGCTCTGGT TTCAAACCAA TACGGGCCAG AGCACCTCAT CATTCAAACT AAGCAACCAA GAGACGTATT ACGCAATATT CGCGCCGCGG GCTCTGTGTT TTTAGGCGCT TATACTCCAG AATCTGTCGG CGATTATGCC AGCGGTACTA ATCACGTCTT ACCGACCTAC GGCTATAGCA AAACCGTTTC TAGCCTATCT CTGGCAGACT TTAGCCGCAG ATTCACGGTA CAAGAGCTCA ATGCTAAAGG GCTACAAACT ATTGCAGATA GCGTAATGAC ACTGGCAGCA GCCGAGCTAC TCGATGCCCA CAAGAATGCC ATAGCCATTC GACTCGCAAG CCTTAGTGCA GATGATGACA CTAATAGCGG TAATGAGGAG GAGTTATGA
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Protein sequence | MQILNWQSLS PQAQLAALKR SPLIGDNSLE QNVARIIEAV VANGDQALKD FNREFDGVNL ETLKLTTTQI EQSCKLVPES LKQAIAQAKN NIERFHQAQL QPKVDIETQA GIRCELRSEP IERVGLYIPG GTAPLISTVL MLALPAKIAG CNKRVLVSPP PINDAIIYAA NECGIEEIYQ VGGAQAIAAL AFGTESLPQV DKIFGPGNRF VTEAKRAVSQ DNRCTVSIDM PAGPSEVLII ADGQANAEFV AADLLSQAEH GADSQVMLVT DSTELAEAVN TALANQLKQL SRTEIATTAL KSSRTLIVDD IQMAALVSNQ YGPEHLIIQT KQPRDVLRNI RAAGSVFLGA YTPESVGDYA SGTNHVLPTY GYSKTVSSLS LADFSRRFTV QELNAKGLQT IADSVMTLAA AELLDAHKNA IAIRLASLSA DDDTNSGNEE EL
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