| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2442 |
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| Symbol | |
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| ID | 5662835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2986307 |
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| End bp | 2987302 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641237068 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001502297 |
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| Protein GI | 157962263 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00214249 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTTTAG GGAAAAAGAT TCTGACTTTA GCGTGTTCTT TGAGTTTTTT ATCGTCCACA
GCAATGGCCG AGAGTGAGAC CCAAGGAACG TTTAGTAACT ATGTTGCTGA GCTTAAGCAA
GATGCGATAG ATAAAGGTTT CAGTCAGCAA ACGATTGATG AGGTTTTCCC TAAAATAAAG
ATGTTTAAAA AGGCGCTGGT TTCCAATAAA GACCCTATTG AAGATCCCAT TACCCTTGAG
ACATACCTCC CACAAATAGT ACCTCAAACA AAGGTTGATC TGGCTAGAGC GTTTTACAAG
CAACACTACA CCGAGCTTGA AAAAATTGGC GAACGTTATG GCGTTCAGCC GCGCTTTATT
GTGGCGCTTT TGGGCATAGA GTCTAACCTT GGCCAAGATG CGGGTGGCTA CCCTGTATTA
TCAGTTACAG CCTCTCTAGC CTATCAAGGT CAGCGCGAAG CCCATTTCCG TCAAGAGTTT
TTTGCAGCTC TAAAGATTGT CGACCAAGGC CATATCGATT TTTCCGAGTT AAAGGGCACT
TCGACAGGAA CCATGGGGCA GCCTCTGTTT TTACCTAGTA TCTATCTAGC TTACGCTCAA
GATGGCGATG GCGATGGTAG AAAGGATATC TGGAGTAATA ACAGTGATGT TTTTGCATCA
GCAGCTTATT ATCTGCAGCA GGCTGGCTGG AAAGCAACGG AAACCTGGGG CAGGCAAGTT
AAGGTCCCCA ATCAATTTCA GTCTTCTCTT GCTGACTTGA GTATCAAGAA AAGCTTTAAT
GAGTGGCAAG CTTTGGGCGT TAGGCGTTTT GACGGCAGTG ACTTACCCAA ACGAGAAGAT
ATGCAGATAT CTATGGTGAT GCCTGACGGC ATTGCGGGGC GTAGCTATCT TATTTATGAT
AATTACCGCG GTTTGCTGCA ATGGAATAAT TCAGACTACT TTGCTATTTC CGTTACCTAC
CTTTCAGAAA GAATTAAGTA TCCTCCGATC ATCTAA
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| Protein sequence | MFLGKKILTL ACSLSFLSST AMAESETQGT FSNYVAELKQ DAIDKGFSQQ TIDEVFPKIK
MFKKALVSNK DPIEDPITLE TYLPQIVPQT KVDLARAFYK QHYTELEKIG ERYGVQPRFI
VALLGIESNL GQDAGGYPVL SVTASLAYQG QREAHFRQEF FAALKIVDQG HIDFSELKGT
STGTMGQPLF LPSIYLAYAQ DGDGDGRKDI WSNNSDVFAS AAYYLQQAGW KATETWGRQV
KVPNQFQSSL ADLSIKKSFN EWQALGVRRF DGSDLPKRED MQISMVMPDG IAGRSYLIYD
NYRGLLQWNN SDYFAISVTY LSERIKYPPI I
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