| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2439 |
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| Symbol | nhaB |
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| ID | 5662832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2983416 |
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| End bp | 2985002 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641237065 |
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| Product | sodium/proton antiporter |
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| Protein accession | YP_001502294 |
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| Protein GI | 157962260 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3067] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00774] Na+/H+ antiporter NhaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000572819 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGTGA CAATGAGTCG GGCGTTTCTT GATAACTTCT TAGGTAACTC ACCGAAGTGG
TTCAAAATCG CGATCATATC GTTCTTAGTG ATCAACCCTA TCGTGTTTTA TTTTAATCCA
TTCGTAGCGG GTTGGTTGTT AGTTGTTGAG TTTATCTTCA CCTTAGCTAT GGCGCTTAAA
TGTTACCCGC TGCAACCAGG CGGATTATTA GCGATTGAAG CTGTGGCTAT CGGCATGACT
TCGCCGAGCC AAGTGCTACA TGAAATTGAA GCAAACCTAG AAGTGGTTCT ACTACTGGTC
TTTATGGTCG CCGGTATTTA CTTCATGAAG CAGTTGCTTC TGTTTGTTTT CACCAAAATG
ATCACTAAAG TACGTTCAAA GATATACGTT TCTTTATTGT TCTGTATTTC ATCAGCATTC
CTTTCTGCGT TCTTAGATGC ATTAACCGTT ATCGCAGTGA TTATTACTGT TGCGGTTGGT
TTCTACTCTA TTTACCACAA AGTAGCATCA GGAAAGACCT TTGGTGAAAG TCACGACCAC
ACCTCAGATG GCTATCCACA GCTATGTGAA GAAGAGCTTG AATCATTCAG AGGCTTCTTA
CGTAACTTGC TTATGCATGC CGGTGTTGGT ACTGCATTAG GTGGTGTTTG CACCATGGTT
GGTGAACCAC AAAACCTGAT TATTGCTGCA CAAGCAAACT GGCAGTTCGC TGAATTTGCT
ATTCGCATGT CACCAGTAAC TGTGCCTGTA TTCTTTGCTG GTATTACAAC CTGTTTTTTA
GTTGAGAAAT TTAAGGTGTT TGGCTACGGT CAACAGCTAC CTGACGCGGT TCATAAAATC
CTATCTGATT ACGACGCTCA TGAAGATGCA AACCGCACCA AGCACGATAA AGTAAAGCTT
CTTATCCAAG CGGTTATTGG TGTTTGGTTA ATCGCGGGTC TTGCTCTGCA TTTAGCTTCT
GTTGGTCTAA TCGGTCTTTC TGTGATTATT CTTGCGACTG CATTTAACGG TATCACTAAC
GAGCACGCAC TAGGTAAAGC CTTCGAAGAA GCCCTACCAT TTACGGCGCT ATTAGCGGTA
TTCTTCGCTA TCGTTGCTGT GATTATCGAT CAACAGTTAT TCGCACCTGT TATTCAGTGG
GCACTAAGCT ATGAAGGTAA CACTCAGTTA GTGATCTTCT ACATTGCTAA CGGTCTGCTT
TCAATGGTGA GCGATAACGT ATTCGTAGGT ACGGTGTACA TTAACGAGGT GAAATCTGCA
CTACTTAATG GCCAAATCAC TCGTGATCAG TTCGACCTTC TTGCTGTAGC AATCAACACG
GGTACTAACC TACCTTCTGT TGCGACGCCA AATGGTCAGG CTGCGTTCCT ATTCTTACTA
ACATCTGCTA TCGCCCCACT TATCCGTCTT TCTTACGGAA GAATGGTGTG GATGGCGCTG
CCATACACTA TCGTACTCTC TATCGTAGGT GTACTTGCGA TTCAGTTAGG TGCGCTAGAG
CAGATGACAC AATACTTCTA TGACAGTCAA ATGTTAATCC ATCACTCTGC TCAAGCAGCT
GCAGATGGTG TAGTATCATC ACATTGA
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| Protein sequence | MPVTMSRAFL DNFLGNSPKW FKIAIISFLV INPIVFYFNP FVAGWLLVVE FIFTLAMALK
CYPLQPGGLL AIEAVAIGMT SPSQVLHEIE ANLEVVLLLV FMVAGIYFMK QLLLFVFTKM
ITKVRSKIYV SLLFCISSAF LSAFLDALTV IAVIITVAVG FYSIYHKVAS GKTFGESHDH
TSDGYPQLCE EELESFRGFL RNLLMHAGVG TALGGVCTMV GEPQNLIIAA QANWQFAEFA
IRMSPVTVPV FFAGITTCFL VEKFKVFGYG QQLPDAVHKI LSDYDAHEDA NRTKHDKVKL
LIQAVIGVWL IAGLALHLAS VGLIGLSVII LATAFNGITN EHALGKAFEE ALPFTALLAV
FFAIVAVIID QQLFAPVIQW ALSYEGNTQL VIFYIANGLL SMVSDNVFVG TVYINEVKSA
LLNGQITRDQ FDLLAVAINT GTNLPSVATP NGQAAFLFLL TSAIAPLIRL SYGRMVWMAL
PYTIVLSIVG VLAIQLGALE QMTQYFYDSQ MLIHHSAQAA ADGVVSSH
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