| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2430 |
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| Symbol | |
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| ID | 5662823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2968293 |
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| End bp | 2972180 |
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| Gene Length | 3888 bp |
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| Protein Length | 1295 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641237056 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_001502285 |
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| Protein GI | 157962251 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCACTTGA GTTCGCAACA GCATCCTTTA TCTAACGCAT TCTTAAAATC CTGTTATGAA
GCGGACGCCG CTAAAATTAG GCGTCGTCTG TTTAGGCTCA GAAAAGATCC TGACTCAGAA
AAGAAAACGG CTACCCTTGA AAGCCTCGAG CTGTTAGCGC TTGAGTCTCG GCAGAAAGTC
GAGTTGCGTT TGGCTAACCG CCCTAAAATT ACCTATCCCG ATAGTTTACC TGTATCGCAA
AAGCGCGACG AAATTGCCAC CGCGATAGCC GAAAACCAGG TTGTGATTGT GGCGGGTGAA
ACCGGCTCGG GTAAAACGAC TCAGTTGCCT AAAATCTGTC TCGAACTTGG CTTAGGTTCT
CGGGGCGTAA TTGGCCATAC TCAGCCTCGC AGATTAGCCG CGCGCAGTGT TGCCACGCGT
ATCGCTGAAG AGATGAATAC GCCACTAGGC GAAGCTGTTG GCTTTAAAGT CCGCTTTGCC
GATGCAATAA ACAGTGACTC CTATATCAAG TTAATGACCG ACGGTATTTT GCTAGCCGAG
TTAACGAATG ATAAATACTT AAATCAATAC GACGCTATTA TTATCGATGA GGCACACGAA
CGTAGCCTGA ATATCGACTT TATCTTGGGT TATTTGAAAA ATGTGCTGAA TAAGCGCCCT
GATCTTAAGG TGATTATTAC CTCGGCGACG ATCGACGTGG ACCGCTTCTC TAAACACTTT
AATAATGCCC CTGTGATTGA AGTCTCTGGC CGTACTTATC CGGTAGAGAC TCGTTATCGT
CCATTGGTGC AAGACCAAGA TGAAGATTTA GATCTTGTTG AAGGTATTTT CGCCGCAACC
GATGAGCTGA TGCAGGAAGG CCTTGGCGAC ATTCTTATTT TTATGAATGG TGAGCGTGAA
ATTCGTGACG TCGCCGAGCA GCTTAATCGT CGTCAATATC GCGATACTGA AATTTTACCC
TTGTATGCTC GTTTATCTTA CGGCGAGCAA TCAAAAGTCT TTAGTAGCCA TGTAGGCCGC
CGCATTGTAT TGGCGACCAA CGTAGCAGAA ACCTCTCTCA CGGTACCGGG TATTCGTTAT
GTCATTGACC CAGGCACGGC GCGCATTAGT CGCTATAGTT ACCGTACTAA AGTGCAGCGT
TTACCTATTG AGCCAATCTC TCAAGCCAGT GCTAACCAGC GACAAGGGCG TTGTGGTCGT
GTTGCTCCGG GTATTTGTAT CAGGCTTTAT AGTGAAGATG ACTTTATCTC TCGTCCTCAG
TTTACCGATC CCGAAATTCT TCGCACCAAC TTAGCCTCGG TTATTTTGAA GATGTTGTCG
ATTGGGCTTG GTGATATCGA AGGCTTCCCG TTTATTCAGC CACCTGACTC TCGCTATATT
CGAGATGGTT TCTTATTGCT TGAAGAGTTG CAGGCAGTGA TCCAAAACAA AGGTCAGCTA
AACCTTACTC AGCTGGGTCG TCAGTTGGCA CATATTCCCG TGGATCCCCG CCTAGCACGT
ATGGTGATTG AGGCGCAGCA AAATGGCTGT TTGCATGAAG CCTTAGTGAT CACTGCGGGC
CTTTCTATTC AAGATCCCCG CGAACGCCCA ATGGATAAAA AGCAGGCGGC AGATCAGGCT
CATAGTCGCT ACACTGACAA AGACTCCGAT TTCGTCTCAT GGCTTAATCT GTGGGATTAT
TTAAAGCAGA GCCAGAAAGA GCTGTCCAGC AGCCAATTTA GAAAGCAGTG TAAGACAGAG
TTCTTGGCTT ATCTGCGCGT TCGTGAATGG CAAGATTTGT ACACTCAGCT AAGGCAAGCG
ACCCATGAGC TTAAATGGAA GCTGAACTCG CCGAGCGAAG AGCTGGACTA TGAAGCACTG
CACCGCTCGT TACTGACGGG GCTGTTAAGC CATATCGGTT TTAAAGATAA AGACAATGAA
TACTTAGGCG CCCGTAATCG CAAGTTCTTT GTGTTCCCAG GCTCGCCATT AGCGAAAAAA
GGCCCTAAGT GGATTATGGC GGCGGAGCTG ACGGAAACCT CGCGTTTGTT TGCTCGCTGC
TGCGCCAAAA TTCAACCTGA GTGGGTTGAG CCACTGGCGG CGCATCTGGT GAAGAAGAAC
TATGTTGAGC CACATTTTGA GTCTAAGCTG GGCTCAGTGG TCGCATTAGA GAACCAAGTG
CTTTTTGGCC TGCAAATAGT TAATCGACGC AAGGTGCAAT ACGGTCCCGT TGAGCCTGTT
GAAGCGCGAG AGATCTTTAT TCGTTCGGCA CTGGCAGACG GTGAGCTCAG AACCAATGAA
GCCTTTTTTA TTAATAACCA AAAGTTATTG CTAGATATTG AGTCGCTTGA ACATAAGTCC
CGTCGCCGCG ATATTTTGGT GGATGAGCAG GCGCTGTATG CGTTTTACGA GCCTAAAATT
CCAGATGGGA TCTATAACGC GCCTAAGTTT GTAAAGTGGT GGAAAAAAAC TAAGCAGACA
ACGCCTGATT TGCTCGATTT CGAGCGTGAA ACCTTGATGC AACGAAGTAG TGACCACATC
TCTGCGTTGG ATTTTCCTGA GAAATGGCAT AAAGGCAACT TAGTCCTTAA GGTGAGTTAT
CATTTTGAAC CATCACTAGC AGATGATGGT GTTTCTGTGC ATATTCCTGT GGCACTGATC
AACCAAGTCG ATGAGCAAGA CTTTGATTGG ATAGTACCGG GCCTTCGTGA AGAGAAGTGC
ATTGCACTCA TCAAGTCACT GCCTAAGGCA CTGCGGCGTA ACTTTGTGCC AGCGCCTGAT
TACGCCAAGG CTTGTTTACA GGCGATGACA CCGTTTGAGC TACCTCTTGT CGATGCCATG
TGTAAACAGC TGCTGCGTAT GAGCGGCACG CGTATTTCGC CAGATGACTT TGACTCGTCA
CAATTTGCTA AACACCTGTT AGTTAACTTT AAAATTGAAG GCGATAAAGG CAAGTTGTTG
GCAGAAGGCC GTGAGCTAGA GCCGTTAAAA GCCAGTATGC AAGGCCAAGT GGTGCAAGCT
ATTCGAAAGG TTGCGGACTC AGGCATAGAG AAAAAAGGCC TTGAGCAATG GACCTTTGGC
GATTTACCAA AGCAGTTTGA GCAGAAGAAA GGTAACTTTG AAGTTAAAGC TTTCCCGGCG
CTGGTGGATG ATAAAACCAG CGTGTCGATC AAATTATTTG ATGATGAATT TGAGGCGCAA
AAGCAGCATC GTATCGGCTT ACAACGTTTA TTGCTGCTTA ATATTCCGTC ACCGGTAAAG
CACTTACAAA AATCCTTACC AAACAAAGCC AAATTAGCGA TGTACTTCAA CCCATTTGGG
CAAGTAAATA TTCTCATCGA TGATATTTTA TCGGCTGCTG TACAACAGCT GCTGGATGAG
AAGGGCATAG ACGTTCGTTC AGAAACAGCC TTTGCCGAGG CCAAAGACTG GGTAAGGCAG
GAGCTTAACC CTACCGCCGA GAAAATCGCC TTAAAGGTCG AAGAGATCTT AACCATCTAC
AATCGTATTA AGAAGCGCTT GAAGGGCAAA ATAAGTCTAG ATATCGCTTT TGCGATGAGT
GATATTCAAA GCCAATTAGA CCAGTTGGTG TTTAAAGGCT TTGTAGAACA ATCTGGCTGG
CAACGATTAG GCGACCTGAA CCGATATCTA AAAGGCATTG AAAACCGTCT AGAAAAGTTA
CCTGTTGACC CTAACCGAGA CCGCTTGCAT ATGCTTAGCG TCAATAAGGT ACAAGAGTTA
CTGAGGGCAC AATTGGCTAA GTTACCTAAG TCTATGCCTG TCCCTGATGT GTTAATTGAA
GCTCGCTGGA TGATTGAAGA GTATCGGGTG TCCTGTTTTG CCCAGGTGTT AGGTACGGCT
TATCCAATCT CAGAAAAGCG AATTTTAAAT CAGATAGCTC AAGCATGA
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| Protein sequence | MHLSSQQHPL SNAFLKSCYE ADAAKIRRRL FRLRKDPDSE KKTATLESLE LLALESRQKV
ELRLANRPKI TYPDSLPVSQ KRDEIATAIA ENQVVIVAGE TGSGKTTQLP KICLELGLGS
RGVIGHTQPR RLAARSVATR IAEEMNTPLG EAVGFKVRFA DAINSDSYIK LMTDGILLAE
LTNDKYLNQY DAIIIDEAHE RSLNIDFILG YLKNVLNKRP DLKVIITSAT IDVDRFSKHF
NNAPVIEVSG RTYPVETRYR PLVQDQDEDL DLVEGIFAAT DELMQEGLGD ILIFMNGERE
IRDVAEQLNR RQYRDTEILP LYARLSYGEQ SKVFSSHVGR RIVLATNVAE TSLTVPGIRY
VIDPGTARIS RYSYRTKVQR LPIEPISQAS ANQRQGRCGR VAPGICIRLY SEDDFISRPQ
FTDPEILRTN LASVILKMLS IGLGDIEGFP FIQPPDSRYI RDGFLLLEEL QAVIQNKGQL
NLTQLGRQLA HIPVDPRLAR MVIEAQQNGC LHEALVITAG LSIQDPRERP MDKKQAADQA
HSRYTDKDSD FVSWLNLWDY LKQSQKELSS SQFRKQCKTE FLAYLRVREW QDLYTQLRQA
THELKWKLNS PSEELDYEAL HRSLLTGLLS HIGFKDKDNE YLGARNRKFF VFPGSPLAKK
GPKWIMAAEL TETSRLFARC CAKIQPEWVE PLAAHLVKKN YVEPHFESKL GSVVALENQV
LFGLQIVNRR KVQYGPVEPV EAREIFIRSA LADGELRTNE AFFINNQKLL LDIESLEHKS
RRRDILVDEQ ALYAFYEPKI PDGIYNAPKF VKWWKKTKQT TPDLLDFERE TLMQRSSDHI
SALDFPEKWH KGNLVLKVSY HFEPSLADDG VSVHIPVALI NQVDEQDFDW IVPGLREEKC
IALIKSLPKA LRRNFVPAPD YAKACLQAMT PFELPLVDAM CKQLLRMSGT RISPDDFDSS
QFAKHLLVNF KIEGDKGKLL AEGRELEPLK ASMQGQVVQA IRKVADSGIE KKGLEQWTFG
DLPKQFEQKK GNFEVKAFPA LVDDKTSVSI KLFDDEFEAQ KQHRIGLQRL LLLNIPSPVK
HLQKSLPNKA KLAMYFNPFG QVNILIDDIL SAAVQQLLDE KGIDVRSETA FAEAKDWVRQ
ELNPTAEKIA LKVEEILTIY NRIKKRLKGK ISLDIAFAMS DIQSQLDQLV FKGFVEQSGW
QRLGDLNRYL KGIENRLEKL PVDPNRDRLH MLSVNKVQEL LRAQLAKLPK SMPVPDVLIE
ARWMIEEYRV SCFAQVLGTA YPISEKRILN QIAQA
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