| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2427 |
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| Symbol | |
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| ID | 5662820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2964400 |
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| End bp | 2966889 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641237053 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_001502282 |
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| Protein GI | 157962248 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0968104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGAC GCGAATTTAT GAAGGCCAAC GCTGCTTTGA CTGCAGCGAG TGTCGCTGGC
CTAGCCTTAC CCGCTACCGC GAGTAACCTG ATCACCAGTT CTGAAGAAAC AAAACTAGAA
TGGAACAAGG CGCCGTGTCG TTTTTGCGGT ACAGGTTGCT CGGTGATTGT TGCGACACGC
GACGGCAAAG TGGTTGCAAC ACATGGTGAT GCAGAAAGTG AAGTGAACAA GGGCCTTAAC
TGTATCAAGG GCTACTTCCT ATCTAAGATC ATGTACGGTA AAGATAGACT TCAAACCCCA
ATGCTACGTA TGACAGACGG TAAGTATGAC AAGAACGGTG AGTTTACTTC CGTATCTTGG
GATACCGCGT TTGATACTAT GGCGCAAAAG TGGAAGAAAA CCATTAAAGA CAAAGGACCA
ACCGCAATTG GTATGTTTGG TTCTGGTCAG TGGACTGTTT GGGAAGGCTA CGCGGCTTCA
AAACTGATGA AAGCGGGCTT TGGTTCAAAC AATATCGACC CTAACGCTCG TCACTGTATG
GCCTCTGCCG TAGGTGGCTT TATGCGTACC TTCGGTATCG ACGAGCCAAT GGGTTGCTAT
GATGATATGG AAGCGGCCGA TGCATTCGTG CTTTGGGGCT CTAATATGGC AGAGATGCAC
CCGATCCTTT GGAGCCGTGT GACAGATCGC CGCTTAAGCG CCCCTCATGT GAATGTGGCA
GTTCTTTCGA CATTTGAACA TAGATCGTTC GACCTTGCCG ATTTAGGCAT CGTATTTACG
CCACAGACTG ATTTAGCAAT GCTGAACTTC GTTGCAAACT ACATCATTCA AAACGATAAA
GTGAATTGGG ACTTTGTTAA CAAACACGTT AACTTCCGCA AAGGTGAAAC CGATATCGGT
TATGGCCTGC GTCCATCTCA TCCGCTACAA AAAGCCGCTA AGAACGTCAA AACAGCCGGC
GACTCAACAC CTATCGACTT TGAGGCATTT AAGAAGTTTG TTGCCGATTA CGACGTGAAG
TCTGTTAGCA AGCTTTCTGG GGTACCAGAA CATAAGCTAA TAGAGCTGGC TGAGCTTTAT
GCCGATCCAA ATAAGAAAGT AACCTCTTTC TGGACCATGG GCTTTAATCA GCATACTCGT
GGTGTGTGGT GTAACAACCT TATCTACAAC ATTCACTTGT TAACGGGTAA GATTTCGACT
CCGGGTAACA GCCCATTCTC TCTTACTGGT CAGCCTTCGG CTTGTGGTAC TGCACGTGAA
GTGGGAACCT TCTCACACCG TCTGCCTGCA GACATGGTGG TTAAAAATCC AAAGCATAGA
GCGATTGCTG AAAAGATTTG GCGTATTCCA AGTGGCATTA TTCCACCAAA GCCTGGTTAT
CACGCAGTTG AGCAAAACCG TCGTCTAAAA GATGGTGACA TCAATGCCTA TTGGGTTCAG
GTGAACAACA ATATGCAGGC CGGTCCTAAT ATCAACGAAG AAGGCTTGCC GGGTTATCGC
AACCCTGAAA ACTTCATCGT GGTATCAGAT GCTTACCCAA CAGTAACCAC GCAGGCTGCG
GACCTTATTC TGCCAACCGC GATGTGGGTA GAGAAAGAGG GCGCTTATGG TAACGCCGAG
CGTCGTACCC AATTCTGGCA CCAGATGGTG AAAGCGCCGG GTGAGTCTCG CTCAGATCTT
TGGCAGCTAA TGGAGTTCTC AAAGCGCTTC ACTACTGACG AAGTTTGGCC TGCCGATGTA
CTTGCTGCAA ACCCTGAATT TAAAGGTAAG ACACTGTTTG AAGTGCTGTA TCAAAACGGC
AACGTGGAGA AATTCCCACT GTCAGACAGA AACAGTAAAT ACATGAATGA CGAAGCTGAA
GACTTTGGCT TCTATGTTCA AAAAGGTCTA TTTGAGGAGT ATGCCACCTT CGGTCGTGGT
CATGCCCATG ATTTGGCACC ATTTGATACT TACCATGAGG TTCACGGCCT ACGCTGGCCT
GTTGTGGATG GCAAAGAAAC TAAATGGCGC TTTAAAGAAG GTAGTGATCC CTATGTGAAG
GCGGGTTCTG GTTTTGAGTT CTACGGTAAG CCAGACGGTA AAGCGGTTAT TTTTGCACTG
CCATACGAGC CAGCTGCTGA GTCGCCAGAT GATGAGTTTG ATATTTGGTT ATCGACGGGG
CGTGTACTGG AACATTGGCA TTCAGGCTCA ATGACGCAGC GCGTACCTGA GCTATATCGA
GCCTTCCCTG ATGCTGTGTG TTTTATGCAT CCACAAGATG CCAAACAGCG AGGCTTACGC
CGCGGTGATG AAGTACGGGT GATTTCTCGC CGAGGTGAAA TTAAGACCCG AGTCGAAACT
CGTGGTCGTA ACAAGCCGCC AGTGGGATTA GTGTTCGTGC CTTGGTTCGA TGCGAGTCAG
CTGATTAATA AGGTGACTCT CGATGCAACC GATCCACTGT CTAAGCAGAC CGACTTTAAG
AAGTGCGCAG TGAAGATCGT CAAGGCATAA
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| Protein sequence | MNRREFMKAN AALTAASVAG LALPATASNL ITSSEETKLE WNKAPCRFCG TGCSVIVATR
DGKVVATHGD AESEVNKGLN CIKGYFLSKI MYGKDRLQTP MLRMTDGKYD KNGEFTSVSW
DTAFDTMAQK WKKTIKDKGP TAIGMFGSGQ WTVWEGYAAS KLMKAGFGSN NIDPNARHCM
ASAVGGFMRT FGIDEPMGCY DDMEAADAFV LWGSNMAEMH PILWSRVTDR RLSAPHVNVA
VLSTFEHRSF DLADLGIVFT PQTDLAMLNF VANYIIQNDK VNWDFVNKHV NFRKGETDIG
YGLRPSHPLQ KAAKNVKTAG DSTPIDFEAF KKFVADYDVK SVSKLSGVPE HKLIELAELY
ADPNKKVTSF WTMGFNQHTR GVWCNNLIYN IHLLTGKIST PGNSPFSLTG QPSACGTARE
VGTFSHRLPA DMVVKNPKHR AIAEKIWRIP SGIIPPKPGY HAVEQNRRLK DGDINAYWVQ
VNNNMQAGPN INEEGLPGYR NPENFIVVSD AYPTVTTQAA DLILPTAMWV EKEGAYGNAE
RRTQFWHQMV KAPGESRSDL WQLMEFSKRF TTDEVWPADV LAANPEFKGK TLFEVLYQNG
NVEKFPLSDR NSKYMNDEAE DFGFYVQKGL FEEYATFGRG HAHDLAPFDT YHEVHGLRWP
VVDGKETKWR FKEGSDPYVK AGSGFEFYGK PDGKAVIFAL PYEPAAESPD DEFDIWLSTG
RVLEHWHSGS MTQRVPELYR AFPDAVCFMH PQDAKQRGLR RGDEVRVISR RGEIKTRVET
RGRNKPPVGL VFVPWFDASQ LINKVTLDAT DPLSKQTDFK KCAVKIVKA
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