| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2421 |
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| Symbol | |
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| ID | 5662814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2958596 |
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| End bp | 2960590 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641237047 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_001502276 |
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| Protein GI | 157962242 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCACCA CCACTAAGCC GATTAACGAT TTACTCAAAG AGTGGCAAGA GCAGCGGCTT
CTCACCTCGC TCGACCGGCA CTTTGCCCTG CAATTAGCCC AGCTTCATCA AGAAACTGCG
CCGTTATTCA CGCTTATTTG TTCCTTAGTG AGTCAGTATC TCTCAAGCCA GCATACCTGT
CTGCCGCTAA AACAGATTGA TACCAGCAAT CCATTTAAAG AGCAGATCAG CCAATGCCAA
ATCAATATCA ACATTGATGA GCTTGAACAA ACGTTGTTGC AGTTTGACGC CATTGGCACT
GCCGATGACG CCGAGCTTAA ACCTTTGATA ATCGATAAAG GTAACCTGTA TCTTCAGCGT
TATTTTAGCT ACGAGACGCA GGTTGCCGAA CATCTGAATC GACTCTCTTT TGCGCCAGTT
GACTCTAGTC TTAATGATGA CACTGAACTG GCGAGCGCCA GTGAACTATT AAATCAGTTA
TTTCCAGCCA ATGAGCAGCA ATATGACTGG CAAAAGATCG CCACCGCCAC TGCTATGACA
AAAAAGCTAG CCGTTATTAC AGGCGGCCCT GGTACGGGTA AAACCACAAC CGTTACTAAG
CTGCTGTATT TATTATGCTC AAGGCAGGAG ATGACGATTA GGCTAGTCGC CCCAACGGGT
AAGGCTGCGG CGCGCCTTAG TGAGTCGATT AAAGCGTCAA AGCTTAGACT TGCCAGTGAG
ATGAGCCAAA TTGGCACTGC AGATCTCGAA AAAAACATCG CTAAAATCCC AGAAGAAGCG
GCCACCCTAC ACCGCTTACT TGGGGTGATC CCAAATTCAC ACCAATTTAG GCATCATAAA
GACAACCCAC TCAGGCTGGA TCTGTTAGTG ATAGATGAAG CCTCCATGGT TGATTTACCT
ATGATGCACA AGGTGCTATC GGCTCTGCCT GAGCATGCTA AATTAATTCT ACTTGGCGAC
CAAGATCAGC TCGCCTCAGT TGAAGCGGGC GCGGTGCTTG CCGATATCTG TGCTGGTTTA
AAACAAGTTA ATAAGAAAAC AAAGCAGAGT CGCTGGCAGA TGCATTACTC ACCAGCGCAA
GTTGAGCTAC TGAGCCAGTT AACCAGCACC TCCTTAGCGG AGTTTGCCAG CGCAAATCCA
AAAATCGGTG ATAGCTTATG CATGCTGATG CACAGCCACC GCTTTCAGGG GGATGCCGGT
ATTGGTCAAT TGGCAACGGC GGTCAATCAC TCTAACTTAC CTCGTATCGC CGAGGTTTGG
CAGACAGGCT ATCAAGAATT ATGCTGGATA GAACATGCTA TCGCTAATAC TGCCCACGGC
AGCAGTTCGC AAGTAAATAG CTCATCAGCT AATAAAGGGC TTGAAGCGCT ACTTGTTCAG
ACCATTGAGC AATATGGCGT GTACCTAGCG GCCATCTCAC AAGGGGACGT CGATGCAGAC
AAGATCATCG ACAGCTTTAA TCAATACCGT ATTTTATGTG CCATGCGCGC CGGAGAATAT
GGCGTCGAGG GAATAAACCA GAGTGTCACT ACAGCACTAG CCGCTAAGGG ACTCATCCAT
CCGGAGCAAG AGTTTTATGC TGGCCGCCCT ATCATCATTC AGAGCAATGA TTACAACCTA
GGCTTATTTA ACGGTGATAT CGGCTTGATT TTACCCGATA GCAGTAGCCA AACAGGTCGT
TTAATGGCGC ACTTTATTCA GGCCGACGGC AGCTTACTTA AGGTGCTACC AGCGCGATTA
CCGAGCCATG AGACCTGTTA TGCCATGACT GTACATAAGA GCCAAGGTAG TGAGTTTAAC
CATGTATCCT TGGTGCTACC GATAAAACCA AGTATCGCAC AGCAACAGCT CTTAACTAAA
GAGTTAGTCT ATACCGCCAT CACTCGCGCA AAGCATCACT TTACCTGCCT TGGCAGCCAG
AGAGTGTTTG AGCAAGCCAG TCGCTGTCTA ACCCAGCGAG CCTCGGGCTT GGCGCAACGT
TTATGGCGCG ATTAA
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| Protein sequence | MITTTKPIND LLKEWQEQRL LTSLDRHFAL QLAQLHQETA PLFTLICSLV SQYLSSQHTC
LPLKQIDTSN PFKEQISQCQ ININIDELEQ TLLQFDAIGT ADDAELKPLI IDKGNLYLQR
YFSYETQVAE HLNRLSFAPV DSSLNDDTEL ASASELLNQL FPANEQQYDW QKIATATAMT
KKLAVITGGP GTGKTTTVTK LLYLLCSRQE MTIRLVAPTG KAAARLSESI KASKLRLASE
MSQIGTADLE KNIAKIPEEA ATLHRLLGVI PNSHQFRHHK DNPLRLDLLV IDEASMVDLP
MMHKVLSALP EHAKLILLGD QDQLASVEAG AVLADICAGL KQVNKKTKQS RWQMHYSPAQ
VELLSQLTST SLAEFASANP KIGDSLCMLM HSHRFQGDAG IGQLATAVNH SNLPRIAEVW
QTGYQELCWI EHAIANTAHG SSSQVNSSSA NKGLEALLVQ TIEQYGVYLA AISQGDVDAD
KIIDSFNQYR ILCAMRAGEY GVEGINQSVT TALAAKGLIH PEQEFYAGRP IIIQSNDYNL
GLFNGDIGLI LPDSSSQTGR LMAHFIQADG SLLKVLPARL PSHETCYAMT VHKSQGSEFN
HVSLVLPIKP SIAQQQLLTK ELVYTAITRA KHHFTCLGSQ RVFEQASRCL TQRASGLAQR
LWRD
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