Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2419 |
Symbol | |
ID | 5662812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2951072 |
End bp | 2954881 |
Gene Length | 3810 bp |
Protein Length | 1269 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641237045 |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_001502274 |
Protein GI | 157962240 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTATATC TAGTGCAATC AAACCAAATG GAAGCGTTAT CTAAGCTTTT AGCTAATGAA TTACGCACGC CATTGCCTAA CAGCCCATTA TTAATGCCAG AGCATATTTT GGTGCAGAGT CCGGGCATGT CTACCTGGTT AAGATTAGAG ATAGCAAGAC AAAATAACAT CGCTGCCGGC CTTGAGTTTC CACTGCCATC AAGTTTCATC TGGCAGTTGT GTCATACCCT ATTAGAAGAT GTGCCTAAAG AGAACGCCTT CACTAAGGCG GCAATGACTT GGAAGCTGAT GGAGCTGCTG CCCACACTTA TCGACGATGA AGATTTTGCC CCACTGGCAA ATTACCTCAA CAATGGTAAC GCTAGCCAAG AAAGTGTTGT CAAACCCGCT GACTCTGACG ATACCCTAGC TGACTCGTTC TCATTAAGTG GTGATAGCGA AGAGACACAA GAGAGTGAAG ACCAAGGTGA GAGCGAGCAA AATCCACTTA AGCTATATCA GCTCTGTGGC CAAATTGCCG ATATTTTCGA CCAATATCTT GTGTACCGCC CTGATTGGAT CAGCGCCTGG GAGGCGAACG AGCCTACCTT GCCGCCTAAA GGCGATAAGC TTAGCCCTGC TCAAGCCTGG CAGCCCATTC TCTGGCGCGC GCTCATCGAT TTTAATGCCA ACACCTTAGG AAAAAGTCGC TATCACCGCG CTAACTTACA CCAAGCACTG TTTGATGCTC TCGATGATCC TAATACTAGC CTAGAGGCGC TACCTAGGCG CTTATTCGTG TTTGGGATCT CCTCAATGGC GCCACAAACA CTCGATGTCT TGCATTATTT AGCCAAGCGC ATCGACGTGA TAATGCTCAA TTTGAGTCCC TGTCAGCACT ATTGGGGGGA TATTGTCGAT CCGCGTCTGC GCGCACGTAT GGCGCTGCAA TACGCCGATA AACACAAATT GGAAGTAGAA TGGGAAGATA AACTTGAAGT GGGTAACCCA CTGCTTGCCA ACAATGGCAA GATGGGCCGT GAGCTGCTCG ACTTGCTGTT AGAGCTGCCC GAGGAGCATA CCGCATTCGA TCTTGATTAC TATCAAGCGC CTAGTACCCA AACCATGCTA AATGGTGTGC AATATGACAT CTTAGAGCTG ACCACACGAG GCCAGAGTCT AGGGCCCGAT GCCGCGCTGT ACTTAAGCTT AGATGGAAGA CGAGTCATTA CTGATTCCGA TGACTCGATC ACGGTTCGCA GCTGTCACAG CCCGCTACGT GAAGTTGAAA CCCTACACGA CCATCTGCTA GAGATGTTAT CTCGTCCTCT CACAGATGAA CAACTTGCAA ATGGTGAAAC ACCGCTGGCG CCAAAAGATA TCGTGATCAT GATGCCTGAT GTCGCGGCTT ATGCTCCCTA TATTGACGCG GTCTTTGGCG CAAAACAGGG CGGTCACTAT ATTCCCTATG CGATTGCCGA TCGCGGCGCC GCTCAAGAAT CGCCGCTTAT CGCCAGTTTT CTACACCTAT TAAAAATCAA TCAGAGCCGC TTTGGCCTGA CTGATATTAT CAGCATTTTA GAGGTCCCAG CGGTGCTTCG CCGTTTCGAA CTCGACGATG AGAGTCTCGC GGTAATAAAG CGCTGGTTAG ATCAAGCCGG AGTTCGCTGG GGACGAGATG AGACCAGCCG CACTGAGTTT CAACTGCCCG CATTTGAACA AAACTCTTGG GCCTTTGGTA TTAAACGCTT AATTTTAGGC TATAGCTTTA GCGATGACGC GCCACTTTAT CAAGAGCGAT TATCGGTGAA TGGCGTAGAG GGACAAACGG CGCAGGCATT AGGTAAATTG CTCGACTTTA TCGAAGCACT CGATCACGTG CATCACTCAC TCGCTCAAGT CTGCAGCTTA AGTGAGCGCA TGACGCAGCT CGAAGCTATC CTCGAAGATT TTTATGAAGT CGACGATGAC GAGATTGTCC AGCGACAAGA GATCCGTGAG GCCATCGTTA AACTCAACGA GGAGCTTACC GAAGCAGGCC ACACTACGCC TCTAACCATA GAGGTGATCC AGAATTGGTT TAACAGCCGC TTATCAGAAT CTCGAGTAGG CCAGCGTTAT CTTGCCGGTA GTGTTAACTT CTGCACCTTG ATGCCTATGC GCTCTATTCC TTTTAAACTT GTGTGTTTAT TAGGTATGAA CGATGGCGTA TATCCACGTG TTCAGCATCC CGTTGGCTTC GATCTTGTGG CGCAAATGGG GCCGAGAAAA GGTGACCGCT CGCGTCGATT AGACGACCGA TATCTGTTTC TTGAGGCTAT CCTATCGGCT CGCGAGCAGC TCTACATCAG CTATATCGGT AATAGTGAAC GCGATGACTC AGAGCGGATC CCATCTATGT TGGTATCTGA GCTTATTGAG TATTGTCAGT TGGTTTATCT ACCACATGAT CTTGAACAAC AAGCAAGCAC TCATGAGCTT GAGGCCGATG GCAACGCATC ACAGCAACTT ATCGAAAAGA TAGAGAAAGG CGTAGCAAAG CACCTGATCC GCAAGCAGCC TCTACAACCC TTTGATCCGC GACTTTATAG CGCACAAAAC AGCCTAAAGA GCCAAGATAG TGCCGCTCCT AAACTACAAC AAAGCTACTC CGCTCAGTGG TGTCCGCAGG GCGCTCAGTC AAGCGATACC TTTACGGCAT TTCGCAACAG CTATAACGGC TTTATCGGCC ACAACGCTCA ACTACTGCCT TTCAGTGAAA AGGCACATGC TGAAACAATA GACGGCATAG AAACCGAAGA GCTGGAACTA TCGGCACTGA TCCGTTTCTT TAGAAACCCT GCACAATACT TTTTTAATCG AAGTTTAAAG GTTGATCTGG GACTGGATAT TCAGGCAGAT GATAATGACG AGCCCTTCAG CCTCAATGCA CTAGAGCGCT ATAAGCTACA GGCAACACTG CTAGATAACG CTATCGGCAA CGGTGAAGAG CGACCAGAAC AAGCGCTACT TGAGCGATTA AAGGCGCAAG GTAACTTACC ATTAAAGCCC TTTGACGACC TGATTTTAAA TCAGTATCTA CATGATATTA AGCCGCTTAT CGGCCGCTGT TTATACCTAA AAGGCGAAGC TTCTCATTCG GTTGACATCG ACCTGTTATT CGATGAAACA GATGTTGACC TTGATGATAA CAGTAATAAC GAACTTGATA ATCGTTTAGC CCTGAACCTT GTTGGCCGTA TCGATGACTT AAGTGCAAAA GGCTTGGTTA ACTACCGCCC CGGCACCGCC AATGGCCGGG ATTTAATTCG TGTCTATTTA CGTCACCTTT GTCTATGCGC CATGGGAAGC CGCACCCAAG TTCAGGCGCA AAGTGACTCA GTCGTAGCAA ACACCAACAT GGTCAGTTAT CTGCTCGATA TTGGCCATTT CCATGCCTAT GCGCCAATCA CGCCTAAGCA AGCAAAGACT CAGCTAAAGC AATGGATCAG CTGCTTTAAA CTCGGTCAAG TGCAGCCATT AATGTTTATG CCGCGTACCG CTATGGCCTA TGTGGAAGCA GAAGGAAGTC ACAGACAGAA ACTTCTCGAG GCGCAATCAC AATGGCTCGA TGAACAGAGT CAATTAGGTG AAGGCTTAGA GCCCCACTTT CAGCGTCTAT ACCGTTTCCC TGAAGACTTT AGTGAGCAAA CCTTCGCTAA AACGGCAACC CGTTTACTTG AGCCACTTTT AAGCTTGTAT CATAAAGACA AACTCAGTGA GTTGGCCAGC TTCGTCGAGG CCGGTCTAGA TACAGTGGAT CTAACTGATG CACTAGGCGA GGCTAACTGA
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Protein sequence | MLYLVQSNQM EALSKLLANE LRTPLPNSPL LMPEHILVQS PGMSTWLRLE IARQNNIAAG LEFPLPSSFI WQLCHTLLED VPKENAFTKA AMTWKLMELL PTLIDDEDFA PLANYLNNGN ASQESVVKPA DSDDTLADSF SLSGDSEETQ ESEDQGESEQ NPLKLYQLCG QIADIFDQYL VYRPDWISAW EANEPTLPPK GDKLSPAQAW QPILWRALID FNANTLGKSR YHRANLHQAL FDALDDPNTS LEALPRRLFV FGISSMAPQT LDVLHYLAKR IDVIMLNLSP CQHYWGDIVD PRLRARMALQ YADKHKLEVE WEDKLEVGNP LLANNGKMGR ELLDLLLELP EEHTAFDLDY YQAPSTQTML NGVQYDILEL TTRGQSLGPD AALYLSLDGR RVITDSDDSI TVRSCHSPLR EVETLHDHLL EMLSRPLTDE QLANGETPLA PKDIVIMMPD VAAYAPYIDA VFGAKQGGHY IPYAIADRGA AQESPLIASF LHLLKINQSR FGLTDIISIL EVPAVLRRFE LDDESLAVIK RWLDQAGVRW GRDETSRTEF QLPAFEQNSW AFGIKRLILG YSFSDDAPLY QERLSVNGVE GQTAQALGKL LDFIEALDHV HHSLAQVCSL SERMTQLEAI LEDFYEVDDD EIVQRQEIRE AIVKLNEELT EAGHTTPLTI EVIQNWFNSR LSESRVGQRY LAGSVNFCTL MPMRSIPFKL VCLLGMNDGV YPRVQHPVGF DLVAQMGPRK GDRSRRLDDR YLFLEAILSA REQLYISYIG NSERDDSERI PSMLVSELIE YCQLVYLPHD LEQQASTHEL EADGNASQQL IEKIEKGVAK HLIRKQPLQP FDPRLYSAQN SLKSQDSAAP KLQQSYSAQW CPQGAQSSDT FTAFRNSYNG FIGHNAQLLP FSEKAHAETI DGIETEELEL SALIRFFRNP AQYFFNRSLK VDLGLDIQAD DNDEPFSLNA LERYKLQATL LDNAIGNGEE RPEQALLERL KAQGNLPLKP FDDLILNQYL HDIKPLIGRC LYLKGEASHS VDIDLLFDET DVDLDDNSNN ELDNRLALNL VGRIDDLSAK GLVNYRPGTA NGRDLIRVYL RHLCLCAMGS RTQVQAQSDS VVANTNMVSY LLDIGHFHAY APITPKQAKT QLKQWISCFK LGQVQPLMFM PRTAMAYVEA EGSHRQKLLE AQSQWLDEQS QLGEGLEPHF QRLYRFPEDF SEQTFAKTAT RLLEPLLSLY HKDKLSELAS FVEAGLDTVD LTDALGEAN
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