Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2418 |
Symbol | |
ID | 5662811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2948943 |
End bp | 2951012 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641237044 |
Product | transglutaminase domain-containing protein |
Protein accession | YP_001502273 |
Protein GI | 157962239 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.478635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAGA AAGAGCGCCA GAGTATTTCC CGCCATACCT TGATGTGGCT ACTACTTGCC AATATTGCCA TTTTATCTCC GCTCTATGAG CAGGTCACGC TGTGGTCACT GGCAATTTGC ACTATCTGCA TCTTCTGGCG AATTGGCATC TATCTAGGCA GAGTCGCTAA ACCGCCTAAA TGGCTGGTGA CTAGCTTAGC CTTTGCCGCG GCCGCAACTC TGGCAATGGT GGCTGGCCAA ATTGGCGTGC TTACCGCCAT GGTCAACCTG CTTATTTTAG GTTATGCACT CAAATACATA GAGATGCGGA ATCGCCGAGA TGTACGCGCC GTCGTGTTAG CGGGGTATTT TCTAATTGCG TTTACCTTTA TTCACCAGCA AAGCCTGCTC TCTAGCCTAC ATCTCGTGAT TGTTACCATG ATTAATACCT GCGTGTTGAT CAGCCTCTAT CACGATGAAG GTAACTTCAA ATACGCGGCA AAGTTAGGCG GTAAAATCAT CCTACAAAGT ATCCCCTTGG CAGTTATCTT ATTTCTTGTT TTACCCCGAC TGCCTCCGCT GTGGATGGTG CCCCCACAAA ATGGCGCCCA AACAGGGCTT TCAGATAAAG TGAGCTTTGG TGATATTGGC CAGTTAACCC GCTCCAGTGC TTTAGCTTTT AGAGCTACTT TTACTGGTAA TGCACCAAGT AACGACAAAC TTTATTGGCG CGCCATTGTA CTAGAAGACT ATAACGGCAA AGATTGGACT CAAAACCCAA GTATTATCGA GGCGCAGTCA TCGCCTAATA GAACCAGTCC GAGTAACAGG CCTTTTTCAA GTAACGAGCG GACTCGAGTC CAAGCAAATG TATCGACAAT CGATTACCAA ATAATCGCCG AGCAGAGCGC CCAGCACTGG CTATTTGGTT TAGATGTCGC AACCAGCCAA GATCGCGGCA TAAAACGCCT AGCCGATTAC AGCCTCTATG CCACTCGCCC CATAGATCAG AGACGCCTAT ATCAAGTCAC CAGCTTTAAC GAATCGATAA TGGACAGCCA GCTCAGTGAC AGCAGTAAAA CAGTTAACCT CACGCTACCA ACAGGGAGTA ACCCAAAAAC CCAAGCCTTG GCGGCGCAGT TTGCCACTCA CTATCCCTCT GCTGAGCAAA GGCTTAACGC CATGATGCAG TACTTCGCTC AGCAGCCCTA TTATTACACC TTACAACCTC CTAGAGTCGG TAAACAGCAA ATCGATGATT TCCTGATTGA GAATAAGGCG GGATTTTGCG TTCATTACGC CAGTGCATTC GCCTTTATGG CGCGCGCAAC GGGGATCCCT GCTCGGCTCG TCACGGGTTA TCAAGGGGCG GAGTTCAATC CAAGTGCTGG GTATTACAGT ATCTACCAAT ATATGGCTCA CGCCTGGGTT GAAGCATGGC TGCCAAATCG AGGCTGGGTA CGCTTCGATC CCACCGCAAT GATCGCGCCG GAACGGGTCG AGCAAGGATT CGATGCGTTT TTTGACCCAG AATCCACCTA CCTGATGGAC AATCCTTTTA GTGCGCTTGC CTATCGTGAT AACCCCTTTA TAAACCAGAT GCGAATGCAA CTTGCCAGCG TCGACTATTT TTGGAGTGTT TGGGTTCTCG GCTTCAATGA TCAAAAGCAA CAAAGAGTAT TGGAGGAGAT CTTAGGCGAA GTGACCCAAA CTAAACTCAC CATATTTATC CTTATTAGCC TTTGTGTCAT AGGCTTGGCC ATCGCCTATA GCGCAGGGCT GGTGCAGTTT CACCGTTCAA GTGATAAGCA CCTTAATGCC TATTACTCTG TGTGCAAAAT GCTACGTCAA AGAGGGCTTG CTAGAGCCCA CCACGAAGGC CCACTCGATT ACAATCAGCG GGTGGCAGCG GCCTTTCCTG ACATAGCCGA AGACTTTAAC AAGTTAACCC ACTACTTCAT CACCATTCAG TATCAAAACC TCAGTAAGCG CAGCCATAAA AGCTTCTCTC GATTACTTAT CAAGCAATCG AGATGGCTAA AAATCAATAT CGTTAAACAG AGATTGGCAC TTAATAAAAC AAACACATAG
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Protein sequence | MTQKERQSIS RHTLMWLLLA NIAILSPLYE QVTLWSLAIC TICIFWRIGI YLGRVAKPPK WLVTSLAFAA AATLAMVAGQ IGVLTAMVNL LILGYALKYI EMRNRRDVRA VVLAGYFLIA FTFIHQQSLL SSLHLVIVTM INTCVLISLY HDEGNFKYAA KLGGKIILQS IPLAVILFLV LPRLPPLWMV PPQNGAQTGL SDKVSFGDIG QLTRSSALAF RATFTGNAPS NDKLYWRAIV LEDYNGKDWT QNPSIIEAQS SPNRTSPSNR PFSSNERTRV QANVSTIDYQ IIAEQSAQHW LFGLDVATSQ DRGIKRLADY SLYATRPIDQ RRLYQVTSFN ESIMDSQLSD SSKTVNLTLP TGSNPKTQAL AAQFATHYPS AEQRLNAMMQ YFAQQPYYYT LQPPRVGKQQ IDDFLIENKA GFCVHYASAF AFMARATGIP ARLVTGYQGA EFNPSAGYYS IYQYMAHAWV EAWLPNRGWV RFDPTAMIAP ERVEQGFDAF FDPESTYLMD NPFSALAYRD NPFINQMRMQ LASVDYFWSV WVLGFNDQKQ QRVLEEILGE VTQTKLTIFI LISLCVIGLA IAYSAGLVQF HRSSDKHLNA YYSVCKMLRQ RGLARAHHEG PLDYNQRVAA AFPDIAEDFN KLTHYFITIQ YQNLSKRSHK SFSRLLIKQS RWLKINIVKQ RLALNKTNT
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