| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2415 |
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| Symbol | |
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| ID | 5662808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2944618 |
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| End bp | 2946549 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237041 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001502270 |
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| Protein GI | 157962236 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.853717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAAGC AGTTGAGTCG CATTTTAATC GGGGTAATCG CAGTATTTGC ATCCTCCTCT
GCTGTTGCTT CCTCGTTTAC TCAAGAGCAG CAGCAATATT TAGACGCCAG AACCGCACTA
AAGAAAAAGC AATTAGATCG TTACCAATCT CTTAGGGGTG AGCTGGATGA TTATCCTCTC
ACCATCTACC TTGATTTTCA TAACAATGTT AACGACATTG TAAATCTTCC CGCGAAACAG
GCCAAACAAG CATTTGCTGT TTTTGAGGGC AGCCCGCTGT ATAACACCGC TCGCTACCGC
TACCTAAAGC GCAGTGGCAG TGAAAAACGC TGGAAGGACT TCCTAGCCGT CAGTCCAGAC
AAGCCAAATA ATGTCGCCCT ACAGTGTTAC TTTTACCGTG CACAATTACA GCAAGGTAAT
CAACAACTCG CTTTTGATGG CGCCGAATCA CTATGGCTTT ATGGGCGTTC TCGACCAAAA
GAGTGCGACC CGTTATTTAA AGAGTGGCAA AAAGCTGGCC TTCGGACCCA AGAGTTAATT
TGGTCACGTA TGCTACTCAG TTTCGAGCAG GGACAATATG GACTGCTCTC TTACCTTTCT
CGCCAATTGA CCAGCAATAA AGGCGATGCG AAACGATTAC TCGCGGTGTA TAAAGATCCC
CGCAGTCTTC GTCATAAATC AAAATTCAGC GGCTCGGCAA AAATCAATGC CACGATTGTG
GATCTGGGTT TAAGAAAATT AGCTAAGAAA GATTTAAAAC GAGCAGTCAA ACTGTTTGCC
ACTTATCAAA AGGCAGACCG TTTCAGTGAT TACCAAGGAA GAAAACTCAG TCGCTACCTA
GTCAGAAGAG CGCTGATTTA TCAAGTACCC GAGTTGCAAA GCTATGTTGA TACCATTTTG
CCCCTGCTCG ATAGCGATGA CTTAGTCGAA ATGCGTCTAC GCTGGGCCCT GAGAGATAAT
GATCAAAAAA GTTTTAACCA ATTCTTACCC CAGCTAAGCG AGCAAAAACA AAATACAGCC
CGCTGGCAAT ACTGGCGAGC CTCTGTTTTG GCTGATGAAA ATACTGACAC AAGCCTACAG
CAATCAAAAG CATTGTTTGA AAAGCTCAGT CACAAACGTA ATTTTTATGG TTATCTAGCC
GCGGCTAAAC TTAAGCAGCC CTACAAGTTG CAGCACCAAG CGACGAAAAG CGATAAAGGC
TTACAACCTA GTTTATTCAC AGACAAAGGA CTTGCCCGAG TACAGGAATT ACTCGCTATC
GACAAACAAT CGGATGCCAG AGCCGAATGG GTGATGTTGC TTAATCGGCA CAATAAGCAG
ATGCAAAAAG AGTATGCGGT CTATGCCGTT GAGCAAAAGT GGCACAGTTT AGGGGTTCAG
GCCAGCATAC AAGCTCAGCT TTGGAACGAC ATGGATATGC GTTTTCCTTA TGCTGCACAA
GAGTCTTTTA GTCGAGCCAG TAAGAAGTAC GCCGTGGATA TCGATGAGAT CCGCGCTATT
TCTCGCCGAG AAAGTGCCTA CTACCCCAAT GCAACATCGG GAGTCGGAGC TAGAGGGTAT
ATGCAGTTAA TGCCAGCGAC GGCAAAACAA ACAGCCAAGA AAGCCAAACT GCCTTATAAA
GGCACTAAAA GCCTATACGA TGCCAAGCTC AATATCGCTT TAGGCAGCGC CTATTACGGT
GGTTTACTCA AGCAATTTGA TCATAATCGA GTTCTGGCTA CCGCTTCTTA TAATGCCGGG
CCTCATCGTA TAAATCGCTG GTTAAAAAGA ACTGACGGTA AACTCGATGT GGTGAGTTTT
ATCGAGTCAA TTCCCTACCG AGAAACAAGG GAATACGTGC AAGCGGTATT GAGCTATCGA
GTTATTTACC AAGTTAAACA AGGAAAAGCA CCTGAGCTAC TCTCAGAGCA AGAGTTAGAA
TTTAACTATT AA
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| Protein sequence | MHKQLSRILI GVIAVFASSS AVASSFTQEQ QQYLDARTAL KKKQLDRYQS LRGELDDYPL
TIYLDFHNNV NDIVNLPAKQ AKQAFAVFEG SPLYNTARYR YLKRSGSEKR WKDFLAVSPD
KPNNVALQCY FYRAQLQQGN QQLAFDGAES LWLYGRSRPK ECDPLFKEWQ KAGLRTQELI
WSRMLLSFEQ GQYGLLSYLS RQLTSNKGDA KRLLAVYKDP RSLRHKSKFS GSAKINATIV
DLGLRKLAKK DLKRAVKLFA TYQKADRFSD YQGRKLSRYL VRRALIYQVP ELQSYVDTIL
PLLDSDDLVE MRLRWALRDN DQKSFNQFLP QLSEQKQNTA RWQYWRASVL ADENTDTSLQ
QSKALFEKLS HKRNFYGYLA AAKLKQPYKL QHQATKSDKG LQPSLFTDKG LARVQELLAI
DKQSDARAEW VMLLNRHNKQ MQKEYAVYAV EQKWHSLGVQ ASIQAQLWND MDMRFPYAAQ
ESFSRASKKY AVDIDEIRAI SRRESAYYPN ATSGVGARGY MQLMPATAKQ TAKKAKLPYK
GTKSLYDAKL NIALGSAYYG GLLKQFDHNR VLATASYNAG PHRINRWLKR TDGKLDVVSF
IESIPYRETR EYVQAVLSYR VIYQVKQGKA PELLSEQELE FNY
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