Gene Spea_2412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2412 
Symbol 
ID5662805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2941156 
End bp2941785 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content39% 
IMG OID641237038 
Productputative sulfite oxidase subunit YedZ 
Protein accessionYP_001502267 
Protein GI157962233 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCTCGA CTAGCCGTCA TTTGTTTTGG CTAAAAGCAT CATTTCACCT CATTGGATTA 
AGCCCAATAG TTTACTTAGT CCTCAAGGTG TTGAGTGATA ATGCGGGCGG AGATCCTGTG 
CAGTATATTA TCCACTTTAC TGGTACCGGA GCGCTTAACG CGTTAGCGGC AACTTTGCTG 
ATATCACCCT TGGCCAAGAA ATTTAAACTA GGGCTATTAT TGCAAACTCG GCGCTTAGTG 
GGATTGTATG TGTTTACCTA TGCGAGTTTG CATGTGTTGG CTTTTTTTAG CTTGGATCTA 
CTGTTTGCGT GGTCACTATT TTTTGAAGAA GTAGTAAAGC GTCCTTACAT ACTTGTCGGC 
GCGACAGCTT ATATCTTGTT ATTTGCGTTA GCTATTACTT CGTTTAACGC AGTTAGACGA 
AAAATGGGAA AACGTTGGCA AAGACTCCAT AATTTTATAT ATCTTATCGC GGTCTTAGTT 
CCTGTACACT TTTATTGGTC TGTTAAATCT GAAATTATTG AACCTAGCTT GTACTTACTT 
TTTTTTAGTA TGGTACTCGG AGTTAGACTT AAAAAAATTA GAAGTTGGAA ACGGATATTT 
TCAAAGTATT TCAGCATTCC TTTAAAGTAA
 
Protein sequence
MGSTSRHLFW LKASFHLIGL SPIVYLVLKV LSDNAGGDPV QYIIHFTGTG ALNALAATLL 
ISPLAKKFKL GLLLQTRRLV GLYVFTYASL HVLAFFSLDL LFAWSLFFEE VVKRPYILVG 
ATAYILLFAL AITSFNAVRR KMGKRWQRLH NFIYLIAVLV PVHFYWSVKS EIIEPSLYLL 
FFSMVLGVRL KKIRSWKRIF SKYFSIPLK