| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2409 |
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| Symbol | |
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| ID | 5662802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2937695 |
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| End bp | 2939533 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641237035 |
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| Product | AsmA family protein |
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| Protein accession | YP_001502264 |
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| Protein GI | 157962230 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.278474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTT TAAAATGGTT TTTTATAACG CTCTTAGGAT TAGTCCTCGC CTTGGTGCTA
TATGTCACCG TGATTTTTGA CCCTAATGAC TTCAAGCCGC AAATCGTCGA GCTGGTGAAA
AAGCAAACGG GCCGTGAGTT GGCTATTGGT AGTGACTTAT CGTGGACATT TTTTCCTAGC
TTGGGGATAG AGTTGGGGAA GATCACACTT TCAAATCCAG AAGGTTTTAA AAATGCATCC
ATGGTGTCGG TGAACCAAGT CGTTGCCGAA GTTGCATTAA TGCCGCTATT AAAGAAAGAG
GTGGAGATAT CTCAGCTAAA CCTTGATGGC TTGACCTTGA TGCTGGAAAC GCAAAAGGAT
GGGCGAAACA GTTTCGATGG CTTAGCGGGT AACGCGGACA AGAAGAGCGT CTCAAAAGGC
GCGACACAAA ACACGGCTTC GAGTCATGCC ACGCTAGCAC GGCTAGATAT CGGTGGTATC
GCAATTACCA ATACTCAAAT TACTAATATT GACCATTTAA GCCAAAGCGA ACAAGTTTTT
GCCTTAAAAG AGTTAACCTT AGGTCGGTTC CAGTTGGGAG AGTTTGCGCC TTTAAAGTAT
GAATTTGCTG CCACCATGCC TGATATGGCT GTAACTAGCC AAGGGGAAGG GCAGATAAAG
GTCGCTCAAG ATCTTCAGAC TATTACCATT AATGATTTCG TCGTTAATAA TCAAGTCACT
GGTGAAGGTA TACCCAATGG TAGCTTAAAG GCTGATTTAA CCACCTCTTT AGTCGTGGCA
TTAGATAAGC AAACATTGAG TCTAGTGCTT TCAAGCTTTA GTGCTGCCAA TATCAACGCC
AACGGTAAGC TTGATATCGC GTACGGTAGT AAAGTACCTC AGGTTGTCGC TAAGCTTGAG
GTGGGAGATG TCGACCTTGA TGCATTATTG CCAAAGCATG AGGGCGAGGC GGCTAAGCAA
GATAAACCAA AAGATAAGCC AACAGCAAAG CCATCGAAAG CGATTGAGCC AGATTTAACC
GCGATGAAGT CGGTTAATCT TGACGTTGAT GTACGGATCA AGTCAGTCAA AGTGGCTAAC
TTAAAGACTC AAAACTGGGT GATGAAGTTG CTGCTGAAAG GCGGTGTAGC CGATATTAAG
CAATTATCAG CTGATCTATA TGGCGGAAAA ATCAATGCAA CTGCAAAACT CGATGGCCGA
GAAAAAGTAG CTAACTATCA GTTTGATAAG CGTCTTTCAG GCGTGGACAT TCGTGCACTG
CTAATCGATA TGGCCGAAGT AGATCTGCTC GATGGTAAGG CTAACTTTAA CGTAGCGGGT
AAGGGGCGTA GCCTAGTCCC CGATAACTTA AAGCGCAACC TTATCGCAAA CGGTCAGTTT
GAAATTACTG ATGGTGCAAT TCATGGCGTT AATATTCCAC AGATGATCCG TGAAGCAAAA
GCTAAGTTGG GTGGCGATCT GTCGGCAAGT TCTGGCTCTA CTGAAAAGAA GACAGACTTT
ACCAGCATGA CAGGCTCATT TAATGTCGCT AAGGGTGTAG TTACAAATCC TGATCTGGAT
ATGGCTTCAC CACTTATTCG CTTAAAAGGG GCGGGTACGG CTAACATTAT CAGTGAAGCT
TTAGATTATA AGTTAACCAC ATCTGTGGTT GGTTCACTTG AAGGGCAAGG CGGAGACACT
CGCGATTCAC TTTATGGCGT CGAGATCCCA TTTGCCATTA GCGGTACTAT GTCAGAGCCA
AAATTTGCGT TAGACACTAA AGCATTACTG GACTCAAAAC TTAAAGATGA AACCAATAAG
CTAAAAGACA GCTTATTTAA GAAATTTGGA GGCCTTTAA
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| Protein sequence | MKFLKWFFIT LLGLVLALVL YVTVIFDPND FKPQIVELVK KQTGRELAIG SDLSWTFFPS
LGIELGKITL SNPEGFKNAS MVSVNQVVAE VALMPLLKKE VEISQLNLDG LTLMLETQKD
GRNSFDGLAG NADKKSVSKG ATQNTASSHA TLARLDIGGI AITNTQITNI DHLSQSEQVF
ALKELTLGRF QLGEFAPLKY EFAATMPDMA VTSQGEGQIK VAQDLQTITI NDFVVNNQVT
GEGIPNGSLK ADLTTSLVVA LDKQTLSLVL SSFSAANINA NGKLDIAYGS KVPQVVAKLE
VGDVDLDALL PKHEGEAAKQ DKPKDKPTAK PSKAIEPDLT AMKSVNLDVD VRIKSVKVAN
LKTQNWVMKL LLKGGVADIK QLSADLYGGK INATAKLDGR EKVANYQFDK RLSGVDIRAL
LIDMAEVDLL DGKANFNVAG KGRSLVPDNL KRNLIANGQF EITDGAIHGV NIPQMIREAK
AKLGGDLSAS SGSTEKKTDF TSMTGSFNVA KGVVTNPDLD MASPLIRLKG AGTANIISEA
LDYKLTTSVV GSLEGQGGDT RDSLYGVEIP FAISGTMSEP KFALDTKALL DSKLKDETNK
LKDSLFKKFG GL
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