Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2404 |
Symbol | |
ID | 5662797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2932842 |
End bp | 2933738 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641237030 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001502259 |
Protein GI | 157962225 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000653141 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATTA CATTAAAACA GCTAGCCGTT TTTGAAGCGG TAGCTCGCAG CGGGCAAGTT GCAAAGGCGG CCGAGATGTT GAGTTTATCG TCTCCAGCCA CCTCTATGGC ATTGTCAGAA TTAGAGAAGC AACTGGATGC GCGTTTATTT GAACGTATTG GTAATCGCTT ACGGTTAAAC TCTCAAGGGA GTCTACTGTT ACCTTTAGCT ACCCAAGCAC TGCAAAAGAT TGATCAAATT GAACATGCTT TTTCGCCAGC CGGCACCGAG CTTGGCGGTA ACCTCAACGT TAGCGCTAGC TCTACGATAG GTAATTATCT GTTAGCAAAG TCGGCGGTTG CATTTTGTCA GCAGTACACT AATACCTTGG TGAATGTCGA TATCGAAAAT AGCCAAAAGG TCATTAATTC GGTTTTAGAG TTTAGAAGTG AGATGGGTTT TATTGAGGGG CAATGTCTCG ACAGTCGTAT TGCCGTCGAA GCGTGGCACA GAGACAAGTT GTTGGTTTTT TGTCATCCTG CGCACCCGCT CGCGGGTAAA ACTGTTGCGC CGAGTGAGCT CAGCGGCATG CCCTGGGTGA TGCGAGAAGA GGGTTCTGGC ACTCGAGATT GTTTTGTCAG TGCGGCGAAT GCTCTGGATA TGCAACCACA AGAAAAGTTC CGATTTTCGA CTCCGGATGC GATTAAACAA GCGGTAAAGC AGGGAGCAGG GCTTGGGGTG TTATCTGAGC TAACTCTTGA GAAAGAACTG ATCCGTAAAG AGTTGTCAGT CATCGAAGTT GAAGGGTTAG GATTAGAGCG ACAGTTTTAT CGAATCCATC ATAAGAGCCG CCACTTTACC CCGGTGGGTT TAGCCTTTAT TGATTTTTGC CGAACTTTTC TTAATACGGA GCACTAA
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Protein sequence | MRITLKQLAV FEAVARSGQV AKAAEMLSLS SPATSMALSE LEKQLDARLF ERIGNRLRLN SQGSLLLPLA TQALQKIDQI EHAFSPAGTE LGGNLNVSAS STIGNYLLAK SAVAFCQQYT NTLVNVDIEN SQKVINSVLE FRSEMGFIEG QCLDSRIAVE AWHRDKLLVF CHPAHPLAGK TVAPSELSGM PWVMREEGSG TRDCFVSAAN ALDMQPQEKF RFSTPDAIKQ AVKQGAGLGV LSELTLEKEL IRKELSVIEV EGLGLERQFY RIHHKSRHFT PVGLAFIDFC RTFLNTEH
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