Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2393 |
Symbol | fadE |
ID | 5662786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2915939 |
End bp | 2918386 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641237015 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_001502248 |
Protein GI | 157962214 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.756719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTACCC TACTTTGGAT CATGGCGTTG ATTTTTACCA TAGGCGCTTT AGCTTATCTA AGAGTCTCTC TTTTAACCGC CACCTTAGGC ACCGCGGTTG TATTAGCAAT CGGAACCGGC GCCGCGAGCT TAAGCCCATT ACTCTGGGTA GTATTTCTTG CCATTGCCCT GCCTCTTAAT ATCAGCTCAT TCAGACAGAA CGTCATCACT CGACCCCTTC TTAAGATGTA CCGTGGCATT ATGCCGGAGA TGTCTTCAAC AGAAAAAGAA GCCATCGAAG CGGGAACCAC ATGGTGGGAA GCAGACCTAT TTGCAGGTAA GCCCGATTGG AGCAAACTTC ATAACTATCC AAAAGCTAGC CTAAGTGCCG AAGAGCAAGC TTTCCTCGAC GGTCCTGTTG AAGAAGTTTG TCGCATGCTA AACCAACATC AAGTTTCTCA TGAGTTAGGT GATTTACCAG AAGAAATCTG GCAATACCTT AAAGATCATG GCTTCTTTGC GATGATCATT AAAAAGAAAT ATGGCGGCTT AGAGTATTCA GCTTATGCAC AATCACGTGT ATTGCAAAAA CTTGCAGGTC TAAGCAGCGA GCTTGCCTCA ACGGTTGGTG TTCCTAACTC ATTAGGCCCT GGTGAACTAC TGCAGCATTA TGGCACCAAA GCTCAGCAAG ACCATTACCT GCCCCGTCTT GCTCAAGGTC TAGAAGTCCC TTGCTTTGCA TTAACTAGCC CAGAAGCTGG CAGCGATGCA GGCGCTATTC CTGATTTCGG TATCGTGTGT AAAGGCGAAT GGGAAGGCGA AGAAGTACTG GGTATGAAAC TAACCTGGAA CAAGCGTTAT ATTACCCTTG CGCCAGTAGC TACAGTACTT GGCCTTGCAT TTAAGCTTCG CGATCCAGAC CAATTACTTG GCAATCAAGA AGATTTAGGC ATTACCTGTG CACTTATTCC TACCGACATT GAAGGTGTTG AAACTGGCCG CCGCCACTTC CCACTAAACT GTATGTTCCA AAATGGTCCT ACTCGCGGTA ATGAAGTGTT TGTACCACTG AGCTTCATTA TTGGTGGCGT TGAAATGGCT GGCCAAGGCT GGAGAATGCT GGTTGAGTGC CTATCGGTTG GACGTGGTAT TACTTTGCCG TCAAACTCTG CCGGTGGTAT TAAAACTGCA GCCGTTGCAA CGGGGGCTTA CGCCCGCATT CGCCGCCAGT TCAAGCTACC TATCGGTAAA CTTGAAGGCA TCGAAGAGCC GATGGCTCGC ATTGGTGGTA ACGCTTATCT TATGGATGCG GTAACCACAC TGACTACAAC GGGTATCGAC CTTGGTGAAA AGCCATCGGT TATCTCAGCG ATTGTGAAAT TTCATCTCAC TGACAGAATG CAACGATGTG TCATTGACGC CATGGACATT CACGGTGGTA AAGGGGTGTG TTTAGGCCCA AATAACTATC TTGGTCGTGG TTATCAGGCA GCGCCTATTG CAATTACGGT TGAGGGGGCA AACATTCTCA CTCGCTCGAT GATTATCTAT GGTCAAGGTG CTATTCGCTG CCATCCGTAT GTATTAGCCG AAATGGAATC GGCGTTCGAT CCAGATGCAA ACAAGGGCCT ACGTGATTTT GATGCGGCTA TCTTTGGGCA TATCGGATTT ACCACCAGCA ACCTAGTACG TAGCTTGTGG ATGGGTCTAA CGTCTAGCCG TTTCTCTAAT GCGCCATACT CGGATAAGAC GAAGCGTTAC TATCAGCAGA TGAACCGGTT CAGTGCAAAC TTGGCGTTAC TATCAGATCT AGCAATGGCA ACATTAGGTG GTAACCTTAA GCGCAAAGAA CGGATCTCAG CACGTCTTGG CGACTTACTC AGCCAGCTTT ATTTAGCATC GGCAACCCTT AAGCGCTACG AAGATGAAGG CCGACTCACC GAAGATCTAC CATTAGTACA GTGGGCAGTT GAAGACTCAC TCTACAAATT ACAATCATCT TTAGATGATC TACTCGACAA CTTCCCCATG GGTTTAGGTA TTGGACTACG CGCAGTGATC TTCCCATTCG GTCGTCCACT TAAGCGCCCA AGTGATGTGC TTGACCATAA GGTCGCTAAG ATCATGCAAA CCCCTTGTGC AAGCCGCGAC CGCCTTGGTA AAGGCCAGTT CTGGACGCCA ACAGAGCATA ATGCTGTGGG TATTCAAGAG CAGACCTTTA AGGATATCTT GGCATCAGAA CCTATCTACG ACAAAGTCTG TAAGGCCGCA GGTAAACGCC TACCCTTTAT GTGGTTAGAT AAAATAGCTG CAGAAGGTAA AGAGCTTGGT GTGCTAAGTG AAGAAGAAGT CGCATTACTT GAACGAGCCG AAATTGGCCG TATGAAGTCA ATCAACGTCG ATGACTTTGA TCCTGAAGAG CTAAAAGCTC GCACGCTTGA GTACACAAAA GAGGTGCAAG CAGCTTAA
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Protein sequence | MTTLLWIMAL IFTIGALAYL RVSLLTATLG TAVVLAIGTG AASLSPLLWV VFLAIALPLN ISSFRQNVIT RPLLKMYRGI MPEMSSTEKE AIEAGTTWWE ADLFAGKPDW SKLHNYPKAS LSAEEQAFLD GPVEEVCRML NQHQVSHELG DLPEEIWQYL KDHGFFAMII KKKYGGLEYS AYAQSRVLQK LAGLSSELAS TVGVPNSLGP GELLQHYGTK AQQDHYLPRL AQGLEVPCFA LTSPEAGSDA GAIPDFGIVC KGEWEGEEVL GMKLTWNKRY ITLAPVATVL GLAFKLRDPD QLLGNQEDLG ITCALIPTDI EGVETGRRHF PLNCMFQNGP TRGNEVFVPL SFIIGGVEMA GQGWRMLVEC LSVGRGITLP SNSAGGIKTA AVATGAYARI RRQFKLPIGK LEGIEEPMAR IGGNAYLMDA VTTLTTTGID LGEKPSVISA IVKFHLTDRM QRCVIDAMDI HGGKGVCLGP NNYLGRGYQA APIAITVEGA NILTRSMIIY GQGAIRCHPY VLAEMESAFD PDANKGLRDF DAAIFGHIGF TTSNLVRSLW MGLTSSRFSN APYSDKTKRY YQQMNRFSAN LALLSDLAMA TLGGNLKRKE RISARLGDLL SQLYLASATL KRYEDEGRLT EDLPLVQWAV EDSLYKLQSS LDDLLDNFPM GLGIGLRAVI FPFGRPLKRP SDVLDHKVAK IMQTPCASRD RLGKGQFWTP TEHNAVGIQE QTFKDILASE PIYDKVCKAA GKRLPFMWLD KIAAEGKELG VLSEEEVALL ERAEIGRMKS INVDDFDPEE LKARTLEYTK EVQAA
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