Gene Spea_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2393 
SymbolfadE 
ID5662786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2915939 
End bp2918386 
Gene Length2448 bp 
Protein Length815 aa 
Translation table11 
GC content47% 
IMG OID641237015 
Productacyl-CoA dehydrogenase 
Protein accessionYP_001502248 
Protein GI157962214 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.756719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTACCC TACTTTGGAT CATGGCGTTG ATTTTTACCA TAGGCGCTTT AGCTTATCTA 
AGAGTCTCTC TTTTAACCGC CACCTTAGGC ACCGCGGTTG TATTAGCAAT CGGAACCGGC
GCCGCGAGCT TAAGCCCATT ACTCTGGGTA GTATTTCTTG CCATTGCCCT GCCTCTTAAT
ATCAGCTCAT TCAGACAGAA CGTCATCACT CGACCCCTTC TTAAGATGTA CCGTGGCATT
ATGCCGGAGA TGTCTTCAAC AGAAAAAGAA GCCATCGAAG CGGGAACCAC ATGGTGGGAA
GCAGACCTAT TTGCAGGTAA GCCCGATTGG AGCAAACTTC ATAACTATCC AAAAGCTAGC
CTAAGTGCCG AAGAGCAAGC TTTCCTCGAC GGTCCTGTTG AAGAAGTTTG TCGCATGCTA
AACCAACATC AAGTTTCTCA TGAGTTAGGT GATTTACCAG AAGAAATCTG GCAATACCTT
AAAGATCATG GCTTCTTTGC GATGATCATT AAAAAGAAAT ATGGCGGCTT AGAGTATTCA
GCTTATGCAC AATCACGTGT ATTGCAAAAA CTTGCAGGTC TAAGCAGCGA GCTTGCCTCA
ACGGTTGGTG TTCCTAACTC ATTAGGCCCT GGTGAACTAC TGCAGCATTA TGGCACCAAA
GCTCAGCAAG ACCATTACCT GCCCCGTCTT GCTCAAGGTC TAGAAGTCCC TTGCTTTGCA
TTAACTAGCC CAGAAGCTGG CAGCGATGCA GGCGCTATTC CTGATTTCGG TATCGTGTGT
AAAGGCGAAT GGGAAGGCGA AGAAGTACTG GGTATGAAAC TAACCTGGAA CAAGCGTTAT
ATTACCCTTG CGCCAGTAGC TACAGTACTT GGCCTTGCAT TTAAGCTTCG CGATCCAGAC
CAATTACTTG GCAATCAAGA AGATTTAGGC ATTACCTGTG CACTTATTCC TACCGACATT
GAAGGTGTTG AAACTGGCCG CCGCCACTTC CCACTAAACT GTATGTTCCA AAATGGTCCT
ACTCGCGGTA ATGAAGTGTT TGTACCACTG AGCTTCATTA TTGGTGGCGT TGAAATGGCT
GGCCAAGGCT GGAGAATGCT GGTTGAGTGC CTATCGGTTG GACGTGGTAT TACTTTGCCG
TCAAACTCTG CCGGTGGTAT TAAAACTGCA GCCGTTGCAA CGGGGGCTTA CGCCCGCATT
CGCCGCCAGT TCAAGCTACC TATCGGTAAA CTTGAAGGCA TCGAAGAGCC GATGGCTCGC
ATTGGTGGTA ACGCTTATCT TATGGATGCG GTAACCACAC TGACTACAAC GGGTATCGAC
CTTGGTGAAA AGCCATCGGT TATCTCAGCG ATTGTGAAAT TTCATCTCAC TGACAGAATG
CAACGATGTG TCATTGACGC CATGGACATT CACGGTGGTA AAGGGGTGTG TTTAGGCCCA
AATAACTATC TTGGTCGTGG TTATCAGGCA GCGCCTATTG CAATTACGGT TGAGGGGGCA
AACATTCTCA CTCGCTCGAT GATTATCTAT GGTCAAGGTG CTATTCGCTG CCATCCGTAT
GTATTAGCCG AAATGGAATC GGCGTTCGAT CCAGATGCAA ACAAGGGCCT ACGTGATTTT
GATGCGGCTA TCTTTGGGCA TATCGGATTT ACCACCAGCA ACCTAGTACG TAGCTTGTGG
ATGGGTCTAA CGTCTAGCCG TTTCTCTAAT GCGCCATACT CGGATAAGAC GAAGCGTTAC
TATCAGCAGA TGAACCGGTT CAGTGCAAAC TTGGCGTTAC TATCAGATCT AGCAATGGCA
ACATTAGGTG GTAACCTTAA GCGCAAAGAA CGGATCTCAG CACGTCTTGG CGACTTACTC
AGCCAGCTTT ATTTAGCATC GGCAACCCTT AAGCGCTACG AAGATGAAGG CCGACTCACC
GAAGATCTAC CATTAGTACA GTGGGCAGTT GAAGACTCAC TCTACAAATT ACAATCATCT
TTAGATGATC TACTCGACAA CTTCCCCATG GGTTTAGGTA TTGGACTACG CGCAGTGATC
TTCCCATTCG GTCGTCCACT TAAGCGCCCA AGTGATGTGC TTGACCATAA GGTCGCTAAG
ATCATGCAAA CCCCTTGTGC AAGCCGCGAC CGCCTTGGTA AAGGCCAGTT CTGGACGCCA
ACAGAGCATA ATGCTGTGGG TATTCAAGAG CAGACCTTTA AGGATATCTT GGCATCAGAA
CCTATCTACG ACAAAGTCTG TAAGGCCGCA GGTAAACGCC TACCCTTTAT GTGGTTAGAT
AAAATAGCTG CAGAAGGTAA AGAGCTTGGT GTGCTAAGTG AAGAAGAAGT CGCATTACTT
GAACGAGCCG AAATTGGCCG TATGAAGTCA ATCAACGTCG ATGACTTTGA TCCTGAAGAG
CTAAAAGCTC GCACGCTTGA GTACACAAAA GAGGTGCAAG CAGCTTAA
 
Protein sequence
MTTLLWIMAL IFTIGALAYL RVSLLTATLG TAVVLAIGTG AASLSPLLWV VFLAIALPLN 
ISSFRQNVIT RPLLKMYRGI MPEMSSTEKE AIEAGTTWWE ADLFAGKPDW SKLHNYPKAS
LSAEEQAFLD GPVEEVCRML NQHQVSHELG DLPEEIWQYL KDHGFFAMII KKKYGGLEYS
AYAQSRVLQK LAGLSSELAS TVGVPNSLGP GELLQHYGTK AQQDHYLPRL AQGLEVPCFA
LTSPEAGSDA GAIPDFGIVC KGEWEGEEVL GMKLTWNKRY ITLAPVATVL GLAFKLRDPD
QLLGNQEDLG ITCALIPTDI EGVETGRRHF PLNCMFQNGP TRGNEVFVPL SFIIGGVEMA
GQGWRMLVEC LSVGRGITLP SNSAGGIKTA AVATGAYARI RRQFKLPIGK LEGIEEPMAR
IGGNAYLMDA VTTLTTTGID LGEKPSVISA IVKFHLTDRM QRCVIDAMDI HGGKGVCLGP
NNYLGRGYQA APIAITVEGA NILTRSMIIY GQGAIRCHPY VLAEMESAFD PDANKGLRDF
DAAIFGHIGF TTSNLVRSLW MGLTSSRFSN APYSDKTKRY YQQMNRFSAN LALLSDLAMA
TLGGNLKRKE RISARLGDLL SQLYLASATL KRYEDEGRLT EDLPLVQWAV EDSLYKLQSS
LDDLLDNFPM GLGIGLRAVI FPFGRPLKRP SDVLDHKVAK IMQTPCASRD RLGKGQFWTP
TEHNAVGIQE QTFKDILASE PIYDKVCKAA GKRLPFMWLD KIAAEGKELG VLSEEEVALL
ERAEIGRMKS INVDDFDPEE LKARTLEYTK EVQAA