| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2388 |
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| Symbol | |
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| ID | 5662781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2910896 |
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| End bp | 2912617 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237010 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001502243 |
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| Protein GI | 157962209 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.729986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAG CAGGACGCAC TGCGCTGCCC CCTACATTCT TTGTAGCCAA TACCATGGAG
ATCTTTGAAC GCCTTGCTTG GTATGGCTTT TTTGCTCTCT CTTCGCTTTA TATGACCTCA
CCACAAAATC AAGGCGGTCT AGGATTCTCC GAACAAGAGC GTGGCTTATT GCAGGGGATG
ATCCCCTTCT TCCTCTATCT ATTTCCTGTT CTAACAGGCG CCCTCGCCGA CCGCTATGGC
TACCGCAAGA TGTTCCTCGT TGCCTACGCC ATCATGTGCC CAAGTTATTA CTTATTAGGT
CAAGTCGATA CCTTTATGGG CTTCTTTGTC GCCTTTATGG GCGTTGCGGT TGGTGCCGCC
TGCTTTAAAC CTGTCGTCAC CGGCACGGTG GCACGAACCA CAGATGATAC TAACCGCGGC
TTAGGCTTCG GGATCTTCTA TATGATGGTC AATATCGGCG GTTTCTTGGG CCCATTTATC
GCAGGTTATG TTAGAGCGAT AAGCTGGGAC TGGGTATTTA TCATGTCAGC CTTCTGGATT
GCGGTTAACT TCATCCCAGC TTACTTCTTC TATAAAGAAC CAACGGATCA GAGCCAACAG
AAAGGAAAGC CTCTAAAAGC GGTATTCCAA GATATCCAGC AAGTATTAGG TAACGCACGC
TTTGCTATTT TGTTCTTTGG TACCTTAATC ATCTTAATGT CTTACGGTGC TAAATGGATC
ACGGGGGAAA CCACATTAAT CATCTACGCC GTTTGGTTTA CATCTCATAT CATCTGGGAC
AAATTAGCCT CATCTAGCAA GCAGGCCCCT TGGTATGCAC AAAAGATAAG TCTAGGTAAT
AAACCCTTCG TTATTTACCT ACTGATCCTC TCTGGTATGT GGATGGTCTA CCAGCAGATT
TTTATTACCT TGCCTATTTA TATTCGTGAC TTTGTCGATA CCTCAGATCT CGTCTTGATG
CTTGCAGGCT ATCCTGATCT GCAGCAGTTT TTTGCTCCTG TCGATTTAAG TCTATTGCAA
TCAGAAATGA CCCGGTTAAG CCACGAAGTC GCTGCTGGTA CGCTAAATGT ACAACAAGCT
TACTTTGAAT TGGTGCACAC TAAGGTGATG GTGCCAACGG CAGAAATAAG CCAAGGCTTT
GCTGCTATAA CCCAAACACC AACAGCCGCA GCTCAGTATG CCCAAACATG GGCAAGCGAG
TATCGCCAAG TTAATCCTGA GTACCTTATC GGACTTAACT TCCTATCAAT TGTGGTAATG
CAGTTGATGA TTAGCCGCTT CGTTGAACGC TTCCAAGCCC TGCCAGTACT TGTTGGCGGC
ACAATTATTC TTGCCATCGG CACTGCCATT GGCGGTATTG CCCATGGCGC AATCATGGGC
GGAGCCATGG TACTGACCTC AATTTTGGTA TTCTCAATCG GTGAAATGGT GGCCTCACCT
AAGAGCCAAG AATATGTCGC AAGCTTTGCG CCTAATGATA AAAAAGCCAT GTTTATGGGC
TACTACTTCG TCTCTTCGGC GATAGGCTTC TTACTAGCCG GCCCTCTATC TGGTTACCTC
TATGCAGAAG TAGCCAAAGG TGCAGGTCGT CCAGATATGA TGTGGTACAT CATTGGTGGC
TTTGGTCTAT TAACCGCGTT TGGTCTGGTT ATGTTCCACA AATTTGGTAC CACGCCACAA
GCGGATGACG ATACCGATGT GACACTTGCT CAAGCAAGCT AA
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| Protein sequence | MTQAGRTALP PTFFVANTME IFERLAWYGF FALSSLYMTS PQNQGGLGFS EQERGLLQGM
IPFFLYLFPV LTGALADRYG YRKMFLVAYA IMCPSYYLLG QVDTFMGFFV AFMGVAVGAA
CFKPVVTGTV ARTTDDTNRG LGFGIFYMMV NIGGFLGPFI AGYVRAISWD WVFIMSAFWI
AVNFIPAYFF YKEPTDQSQQ KGKPLKAVFQ DIQQVLGNAR FAILFFGTLI ILMSYGAKWI
TGETTLIIYA VWFTSHIIWD KLASSSKQAP WYAQKISLGN KPFVIYLLIL SGMWMVYQQI
FITLPIYIRD FVDTSDLVLM LAGYPDLQQF FAPVDLSLLQ SEMTRLSHEV AAGTLNVQQA
YFELVHTKVM VPTAEISQGF AAITQTPTAA AQYAQTWASE YRQVNPEYLI GLNFLSIVVM
QLMISRFVER FQALPVLVGG TIILAIGTAI GGIAHGAIMG GAMVLTSILV FSIGEMVASP
KSQEYVASFA PNDKKAMFMG YYFVSSAIGF LLAGPLSGYL YAEVAKGAGR PDMMWYIIGG
FGLLTAFGLV MFHKFGTTPQ ADDDTDVTLA QAS
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