| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2382 |
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| Symbol | |
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| ID | 5662775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2903306 |
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| End bp | 2904898 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641237004 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_001502237 |
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| Protein GI | 157962203 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
[COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase
[TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAACG CACATACATT GCCTGTTAGG CTTCCTGTTG TATGGACGAT AGCGGGCTCT
GATAGTGGCG GCGGTGCAGG CATTCAAGCG GATCTGGCAA CAATGTCAGA TCTTGATGCC
CACGCCTGCA GCGTTATCAC TGCGGTGACA GCACAGAGCT CTGTAACTGT GGCATTGGTT
GAGTCTGTAT CAAGTCAAAT GTTGAAGTCT CAGCTAGACA CCTTAGTTAG CGACCTACCG
CCAGCAGCCA TTAAAATTGG CTTGCTGGCC GAGCAGGCTC AAATTGATTA TCTAGCCAAA
TGGTTAGCTA AGCAGCAAGC TAGTTGGCGT CAATCTGGCA TTGTAGTGCC TATTATTTTA
GACCCTGTGA TGGTGGCTAC CTGCGGTGAT GCACTGGCAA ATGGCGGAAG GCTTGATTTT
ACGCCGTTTA AAGGATTACT CACATTAATC ACGCCTAATG TGAGTGAGTT AGCCATTCTG
GCTGCAACAG AGCTTGAGAG TGTTGATGCA TGTATCTCGG CAGCCAAACA GCTATCAGAA
CAGTTAAGCA CTTCGGTGCT AGCCAAAGGT GGCGATCTTG GTCCAGCCTG GTGTCAGCAT
CAGGCTAATG ATTTACTCGT TTGTACTGAT GTTGAAGGAA TATCTGATAA GCATCAGTGG
CAGAGTTTTT GGTTATCAAG TCATCGAGTC AATAGCCAAA ATAGTCATGG TACAGGCTGC
ACCTTGTCAT CGGCAATTGC ATCTGTAATG GCCCATGGCT TTGTGCTCAA TGATGCGATT
GTTGTGGCAA AGGCCTATGT GAATGCAGGA CTGATCGCCA GCTATCAGCC GGGCAGTGGA
CCTGGATGCT TGGCAAGAAC GGCATGGCCA AAAGACTTAC AGCAATTTCC CTATATCAAA
GTTATCACAG CAAGCGATAC CGAACCTATG TCGCTTGCTG CTTGGGAGTT GATGAATAAT
CAGCGAGGCG ACTTTAAGCA GATTGATGGC ACCTTGGGAT TATATCCTGT AGTTGCTGAT
GTTGAATTGC TACAAATCTT GTTAAAAGCG GGGGCTAAAA CAATTCAGCT GCGAGTTAAG
GATGCAAGTT CGCCAACCCT TGAAGCGCAG ATAATCAAAG CCATTGCTCT AGGTCGTGAC
TATCAATCAC GAGTGTTCAT TAACGATCAC TGGCAGCTTG CCATTAAACA TCAAGCTTAC
GGGGTTCACC TTGGTCAGGA AGACTTGCTC GACAGTAATT TAAAGCAGCT ACGTGAAGCT
GACATTGCAC TTGGGTTGTC GAGTCATAGC TATTTCGAAA TTTTGTTGGC AAAGCAACAT
CAGCCATCAT ATATCGCATT TGGGCATATA TTTCCCACCA CCACCAAGCA GATGCCATCT
TTGCCTCAGG GGCTAGAAAA ACTGAGCCGC TATGTTTCTT TGATGAAAGG CGAGCTGCCA
ATCGTCGCAA TTGGCGGCAT AGATGCAGCG CGCCTTAGAA GTGTTAAAGC AACGGGTGTG
GATGACATCG CAGTGGTGCG AGCTTTGACT GAGGCCGATG ATCCCACTGC GGCGTTTACG
GCTCTGAATA GGGCATGGGC TGATGAGAAA TAG
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| Protein sequence | MANAHTLPVR LPVVWTIAGS DSGGGAGIQA DLATMSDLDA HACSVITAVT AQSSVTVALV
ESVSSQMLKS QLDTLVSDLP PAAIKIGLLA EQAQIDYLAK WLAKQQASWR QSGIVVPIIL
DPVMVATCGD ALANGGRLDF TPFKGLLTLI TPNVSELAIL AATELESVDA CISAAKQLSE
QLSTSVLAKG GDLGPAWCQH QANDLLVCTD VEGISDKHQW QSFWLSSHRV NSQNSHGTGC
TLSSAIASVM AHGFVLNDAI VVAKAYVNAG LIASYQPGSG PGCLARTAWP KDLQQFPYIK
VITASDTEPM SLAAWELMNN QRGDFKQIDG TLGLYPVVAD VELLQILLKA GAKTIQLRVK
DASSPTLEAQ IIKAIALGRD YQSRVFINDH WQLAIKHQAY GVHLGQEDLL DSNLKQLREA
DIALGLSSHS YFEILLAKQH QPSYIAFGHI FPTTTKQMPS LPQGLEKLSR YVSLMKGELP
IVAIGGIDAA RLRSVKATGV DDIAVVRALT EADDPTAAFT ALNRAWADEK
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