Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2366 |
Symbol | aspS |
ID | 5662759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2883590 |
End bp | 2885383 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641236988 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_001502221 |
Protein GI | 157962187 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00207934 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAGTC ATTATTGTGG AGACGTCAAT AAGTCTCACG TAGGTCAAGA AGTGACCCTA GTGGGTTGGG TTAATCGCAG CCGAGATTTG GGCGGCGTAG TTTTTCTCGA TCTTCGTGAT AGAGAAGGTA TCGTTCAGGT TGTTTATGAT CCAGACCTTC CTGAAGTTTT TGATGTTGCA AGCACACTAC GCAGCGAATT TTGTGTTCAG ATTAAAGGCC TTGTAAGAGC GAGACCGGAT AGCCAGATTA ACGCAGATAT GCGTACTGGT GAGGTTGAGA TCTTGGGTCT AGAGCTAACT ATTTTAAACA GCTCAGCGCC ATTGCCAATC AACATGGACA AAAATCAGCA TAACACTGAA GAGCAGCGTT TAAAGTATCG TTACTTAGAC CTACGTCGTC CAGAAATGGC TGACCGTATC GTATTCCGTT CAAAGGTTAC TAGCGCGGTA AGACGTTTCT TAGATGGCAA CGGTTTCTTA GATATTGAAA CCCCAATCCT GACTAAAGCG ACACCAGAAG GTGCGCGTGA TTACCTAGTA CCAAGCCGTA CTTATAAAGG TCAGTTCTTC GCATTACCGC AATCACCACA ATTGTTTAAG CAGTTGTTGA TGATGTCAGG TTTTGACCGT TACTACCAAA TCGTTAAGTG CTTCCGAGAT GAAGACTTAC GTGCTGACCG CCAACCAGAA TTCACTCAGA TCGATATCGA AACTTCATTC ATGACTTCTG CGCAAGTAAT GGATAAGACT GAGGAAATGG TACGTGGTTT ATTCAAAGAG TTATTGAATG TTGATTTGGG CGAGTTCCCT AAGATGACAT TCGAAGAAGC GATGCGTCGT TTCGGTTCTG ATAAGCCAGA TTTACGTAAC CCGCTTGAAT TAATCGATGT TGCAGATATC GTCAAAGAAG TTGAGTTCGC AGTATTTAAT GGTCCAGCAA ACGATCCAGA AGGCCGTGTT GCTGTACTAA GTATTCCTGG CGGCGCGAAA CTTTCACGTA AGCAGTTAGA TGAATACGCA AAGTATGTGA CTATTTACGG CGCTAAAGGC CTAGCTTGGA TGAAAGTTAA TGACCTTGCT CAAGGCATGG AAGGCATTCA GTCTCCAGTA CTTAAGTTCC TAAGTGAAGA TGTGGTTAAC GCATTGCTTG AGCGCACAGG TGCTCAAACT GGCGATCTAA TCCTATTCGG TGCAGATAAA GCTAATATCG TTGCAGAAGC GATGGGCGCA CTACGTCTTA AAGCCGGTGA AGACTTTGAC TTGCTACAAG GCGAGTGGAA GCCTCTTTGG GTTGTTGACT TCCCAATGTT TGAACGCACA TCTGATGGCG GCCTGCATGC AATGCACCAC CCATTCACAG CGCCAAGCAA CATGACGCCT GAAGAACTAG AAGCGAATCC AATTGGTGCG ATTTCTGATG CTTATGACAT GGTACTAAAC GGTTGTGAAT TAGGCGGCGG TTCGGTGCGT ATTCATGACA GCAAGATGCA GTCAGCTGTA TTTAGAATTC TAGGCATTAA TGACGAAGAA GCGAGCGAGA AGTTTGGCTT CCTACTCGAA GCATTACGCT ACGGCACACC ACCACATGCA GGTTTGGCTT TCGGTTTAGA CCGTATCATC ATGTTGATGA CGGGCGCGAG CTCAATCCGT GACGTGATGG CATTCCCGAA AACGACGACA GCGGCTTGTC CGTTGACGAA TGCACCAGGA TTTGCCAATC CAGTGCAGTT AGCTGAACTA GGTGTCAGTG TCGTCGAAGC GGAGCCAAAA GCTGACGCTA AAGACACAGA ATAA
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Protein sequence | MRSHYCGDVN KSHVGQEVTL VGWVNRSRDL GGVVFLDLRD REGIVQVVYD PDLPEVFDVA STLRSEFCVQ IKGLVRARPD SQINADMRTG EVEILGLELT ILNSSAPLPI NMDKNQHNTE EQRLKYRYLD LRRPEMADRI VFRSKVTSAV RRFLDGNGFL DIETPILTKA TPEGARDYLV PSRTYKGQFF ALPQSPQLFK QLLMMSGFDR YYQIVKCFRD EDLRADRQPE FTQIDIETSF MTSAQVMDKT EEMVRGLFKE LLNVDLGEFP KMTFEEAMRR FGSDKPDLRN PLELIDVADI VKEVEFAVFN GPANDPEGRV AVLSIPGGAK LSRKQLDEYA KYVTIYGAKG LAWMKVNDLA QGMEGIQSPV LKFLSEDVVN ALLERTGAQT GDLILFGADK ANIVAEAMGA LRLKAGEDFD LLQGEWKPLW VVDFPMFERT SDGGLHAMHH PFTAPSNMTP EELEANPIGA ISDAYDMVLN GCELGGGSVR IHDSKMQSAV FRILGINDEE ASEKFGFLLE ALRYGTPPHA GLAFGLDRII MLMTGASSIR DVMAFPKTTT AACPLTNAPG FANPVQLAEL GVSVVEAEPK ADAKDTE
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