Gene Spea_2366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2366 
SymbolaspS 
ID5662759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2883590 
End bp2885383 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content46% 
IMG OID641236988 
Productaspartyl-tRNA synthetase 
Protein accessionYP_001502221 
Protein GI157962187 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0173] Aspartyl-tRNA synthetase 
TIGRFAM ID[TIGR00459] aspartyl-tRNA synthetase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00207934 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAGTC ATTATTGTGG AGACGTCAAT AAGTCTCACG TAGGTCAAGA AGTGACCCTA 
GTGGGTTGGG TTAATCGCAG CCGAGATTTG GGCGGCGTAG TTTTTCTCGA TCTTCGTGAT
AGAGAAGGTA TCGTTCAGGT TGTTTATGAT CCAGACCTTC CTGAAGTTTT TGATGTTGCA
AGCACACTAC GCAGCGAATT TTGTGTTCAG ATTAAAGGCC TTGTAAGAGC GAGACCGGAT
AGCCAGATTA ACGCAGATAT GCGTACTGGT GAGGTTGAGA TCTTGGGTCT AGAGCTAACT
ATTTTAAACA GCTCAGCGCC ATTGCCAATC AACATGGACA AAAATCAGCA TAACACTGAA
GAGCAGCGTT TAAAGTATCG TTACTTAGAC CTACGTCGTC CAGAAATGGC TGACCGTATC
GTATTCCGTT CAAAGGTTAC TAGCGCGGTA AGACGTTTCT TAGATGGCAA CGGTTTCTTA
GATATTGAAA CCCCAATCCT GACTAAAGCG ACACCAGAAG GTGCGCGTGA TTACCTAGTA
CCAAGCCGTA CTTATAAAGG TCAGTTCTTC GCATTACCGC AATCACCACA ATTGTTTAAG
CAGTTGTTGA TGATGTCAGG TTTTGACCGT TACTACCAAA TCGTTAAGTG CTTCCGAGAT
GAAGACTTAC GTGCTGACCG CCAACCAGAA TTCACTCAGA TCGATATCGA AACTTCATTC
ATGACTTCTG CGCAAGTAAT GGATAAGACT GAGGAAATGG TACGTGGTTT ATTCAAAGAG
TTATTGAATG TTGATTTGGG CGAGTTCCCT AAGATGACAT TCGAAGAAGC GATGCGTCGT
TTCGGTTCTG ATAAGCCAGA TTTACGTAAC CCGCTTGAAT TAATCGATGT TGCAGATATC
GTCAAAGAAG TTGAGTTCGC AGTATTTAAT GGTCCAGCAA ACGATCCAGA AGGCCGTGTT
GCTGTACTAA GTATTCCTGG CGGCGCGAAA CTTTCACGTA AGCAGTTAGA TGAATACGCA
AAGTATGTGA CTATTTACGG CGCTAAAGGC CTAGCTTGGA TGAAAGTTAA TGACCTTGCT
CAAGGCATGG AAGGCATTCA GTCTCCAGTA CTTAAGTTCC TAAGTGAAGA TGTGGTTAAC
GCATTGCTTG AGCGCACAGG TGCTCAAACT GGCGATCTAA TCCTATTCGG TGCAGATAAA
GCTAATATCG TTGCAGAAGC GATGGGCGCA CTACGTCTTA AAGCCGGTGA AGACTTTGAC
TTGCTACAAG GCGAGTGGAA GCCTCTTTGG GTTGTTGACT TCCCAATGTT TGAACGCACA
TCTGATGGCG GCCTGCATGC AATGCACCAC CCATTCACAG CGCCAAGCAA CATGACGCCT
GAAGAACTAG AAGCGAATCC AATTGGTGCG ATTTCTGATG CTTATGACAT GGTACTAAAC
GGTTGTGAAT TAGGCGGCGG TTCGGTGCGT ATTCATGACA GCAAGATGCA GTCAGCTGTA
TTTAGAATTC TAGGCATTAA TGACGAAGAA GCGAGCGAGA AGTTTGGCTT CCTACTCGAA
GCATTACGCT ACGGCACACC ACCACATGCA GGTTTGGCTT TCGGTTTAGA CCGTATCATC
ATGTTGATGA CGGGCGCGAG CTCAATCCGT GACGTGATGG CATTCCCGAA AACGACGACA
GCGGCTTGTC CGTTGACGAA TGCACCAGGA TTTGCCAATC CAGTGCAGTT AGCTGAACTA
GGTGTCAGTG TCGTCGAAGC GGAGCCAAAA GCTGACGCTA AAGACACAGA ATAA
 
Protein sequence
MRSHYCGDVN KSHVGQEVTL VGWVNRSRDL GGVVFLDLRD REGIVQVVYD PDLPEVFDVA 
STLRSEFCVQ IKGLVRARPD SQINADMRTG EVEILGLELT ILNSSAPLPI NMDKNQHNTE
EQRLKYRYLD LRRPEMADRI VFRSKVTSAV RRFLDGNGFL DIETPILTKA TPEGARDYLV
PSRTYKGQFF ALPQSPQLFK QLLMMSGFDR YYQIVKCFRD EDLRADRQPE FTQIDIETSF
MTSAQVMDKT EEMVRGLFKE LLNVDLGEFP KMTFEEAMRR FGSDKPDLRN PLELIDVADI
VKEVEFAVFN GPANDPEGRV AVLSIPGGAK LSRKQLDEYA KYVTIYGAKG LAWMKVNDLA
QGMEGIQSPV LKFLSEDVVN ALLERTGAQT GDLILFGADK ANIVAEAMGA LRLKAGEDFD
LLQGEWKPLW VVDFPMFERT SDGGLHAMHH PFTAPSNMTP EELEANPIGA ISDAYDMVLN
GCELGGGSVR IHDSKMQSAV FRILGINDEE ASEKFGFLLE ALRYGTPPHA GLAFGLDRII
MLMTGASSIR DVMAFPKTTT AACPLTNAPG FANPVQLAEL GVSVVEAEPK ADAKDTE