Gene Spea_2359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2359 
Symbol 
ID5662752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp2875294 
End bp2875935 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content46% 
IMG OID641236981 
Productendonuclease III 
Protein accessionYP_001502214 
Protein GI157962180 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAG AGAAGCGCCG CCAGATCCTT GAAAGACTTA GAGAGAATAA TCCTCATCCT 
GAAACTGAGC TTAATTTCTC AAGCCCTTTT GAGCTGCTGG TTGCCGTTAC ATTATCAGCA 
CAGGCTACGG ACGTTAGTGT TAATAAAGCC ACCGATAAAC TGTTCCCGGT AGCCAATACG 
GCTCAGGCTA TTGCAGCCCT TGGCGTTGAA GGTCTTAAGC AATACATTAA AACCATCGGC 
CTGTACAACA ATAAAGCCAT TAACGTGGTA AAAGCTTGTG AGATCTTAGT CGAAAAATAC 
GATGGTGAGG TTCCAGAGGA TCGTGAGGCA CTCGAAGCCC TTCCCGGTGT TGGCAGAAAG 
ACTGCCAATG TGGTACTCAA CACGGCTTTT GGCTGGCCAA CCATCGCGGT CGACACTCAC 
ATAGACAGGG TATCAAATCG CACTAAGTTC GCAATTGGCA AGAATGTCGT CGAAGTGGAA 
AAAAAGCTGC TAAAAGTCGT TCCAGCCGAG TTTAAGGTCG ATGTACACCA CTGGCTTATA 
TTACACGGTC GCTACACCTG TATTGCCCGT AAACCTCGCT GTGGTAGCTG CATTATAGAA 
GATCTGTGTG AGTACAAAGA TAAGGTTTAT CCTGAAGACT AG
 
Protein sequence
MNTEKRRQIL ERLRENNPHP ETELNFSSPF ELLVAVTLSA QATDVSVNKA TDKLFPVANT 
AQAIAALGVE GLKQYIKTIG LYNNKAINVV KACEILVEKY DGEVPEDREA LEALPGVGRK 
TANVVLNTAF GWPTIAVDTH IDRVSNRTKF AIGKNVVEVE KKLLKVVPAE FKVDVHHWLI 
LHGRYTCIAR KPRCGSCIIE DLCEYKDKVY PED