| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2353 |
|---|
| Symbol | |
|---|
| ID | 5662746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 2869229 |
|---|
| End bp | 2869807 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641236975 |
|---|
| Product | Na(+)-translocating NADH-quinone reductase subunit E |
|---|
| Protein accession | YP_001502208 |
|---|
| Protein GI | 157962174 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA |
|---|
| TIGRFAM ID | [TIGR01943] electron transport complex, RnfABCDGE type, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.182049 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAT ATCTCCTGTT ATTGATTGGC ACAGTGCTAG TCAACAACTT CGTATTAGTA
AAATTTCTTG GCCTTTGCCC TTTTATGGGG GTATCTAGCA AGCTTGAGTC GGCTATCGGC
ATGTCAATGG CGACGACTTT TGTTCTGACG CTAGCCTCAA TTTTAAGTTA TTTGGTCAAC
CAGTATCTGT TGCTACCTTT TGATCTCGGC TATCTGCGCA CCATGAGCTT TATTCTTGTG
ATTGCAGTTG TGGTGCAGTT CACCGAGATG CTGGTTCAAA AAACCAGTGC ATCTTTGCAT
CGCGCCTTAG GTATTTATCT GCCTTTGATT ACCACTAACT GTGCCGTACT CGGTGTCGCC
CTCCTCAACA TTAATGAAAA GCATGGCTTT ATTGAATCTG CCATATTTGG CTTTGGTGCT
GCGGTTGGTT TCTCATTAGT GTTAATTCTT TTCTCTGCCA TGCGAGAGCG TCTTGCTGCT
GCCGATGTTC CCACACCTTT TAAAGGTGGG GCCATTGCTA TGGTTACCGC AGGACTAATG
TCACTCGCGT TTATGGGATT CACAGGGTTG GTTAAATAA
|
|---|
| Protein sequence | MSEYLLLLIG TVLVNNFVLV KFLGLCPFMG VSSKLESAIG MSMATTFVLT LASILSYLVN
QYLLLPFDLG YLRTMSFILV IAVVVQFTEM LVQKTSASLH RALGIYLPLI TTNCAVLGVA
LLNINEKHGF IESAIFGFGA AVGFSLVLIL FSAMRERLAA ADVPTPFKGG AIAMVTAGLM
SLAFMGFTGL VK
|
|---|
| |