| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2351 |
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| Symbol | |
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| ID | 5662744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2863253 |
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| End bp | 2865256 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236966 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001502206 |
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| Protein GI | 157962172 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00949955 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAGAAT CTGTATTTCA ATTAGAGTCC ATGTACAAGC CTGCAGGCGA TCAGCCAACG
GCCATCAACA AGCTTGTTGA GGGACTCGAG TCCGGCGTTG CTTGCCAGAC ACTATTAGGT
GTTACTGGAT CAGGTAAGAC TTTCACTGTA GCGAATGTTA TCGCAAAAAT GTCACGCCCA
ACCATTATTA TGGCGCCCAA TAAGACGCTT GCTGCTCAGC TCTACGGGGA GATGAAAGAG
TTCTTTCCCC ATAACGCCGT CGAATATTTC GTTTCTTACT ACGACTATTA TCAACCTGAA
GCGTATGTTC CTTCAACGGG CACATTTATT GAGAAAGATG CATCGGTGAA TGCACACATT
GAACAGATGC GCTTATCGGC CACCAAAGCC TTATTAGAGC GAAAAGATGT GGTGCTGATT
GCCTCTGTAT CGGCGATTTA CGGCCTGGGC GATCCTAAAG CTTATATGAA GATGCTGTTA
CACCTTCGAG AGGGTGGCAA TATGGAGCAG CGTGATATCT TAAAGCGCCT CAGTGAGCTG
CAATACACCC GTAATGATAT TGAACTGCAG CGCGGTACTT ATCGAGTACG TGGTGAAGTC
ATCGATATCT TTCCGGCAGA TTCGGACAAA AATGCCATTC GCATCGAGCT GTTTGATGAC
GAGATAGAGC GCTTAAGCTT ATTCGACCCA CTTACTGGTC ATGTGGTAAA GCGAATCGCT
CGGATCACCG TTTATCCTAA GAGTCATTAT GTGACGCCTA GAGAATCAAT TTTAGCGGCG
ACAGAAGATA TTAAACAAGA GCTCAGAGAT CGTAAGAAGC AGCTACTTGA ACTCAATAAG
CTGATAGAAG AGCAGCGCAT AACCGAACGT GTGCAGTACG ATGTTGAGAT GATGACTGAA
CTTGGCTACT GCTCTGGCAT CGAAAACTAC TCCCGATACC TATCTGGGCG AGCTCCCGGC
GATGGGCCTC CTACCTTGTT AGACTATCTG CCTGATGATG GTCTGCTGAT TATTGATGAG
TCACATGTCA CAGTGCCGCA AATTGGCGCC ATGTATAAAG GTGACCGTTC GAGGAAGATG
AACCTTGTTG AGTATGGCTT TCGTCTGCCT TCCGCACTAG ACAATCGTCC GCTTAAGTTC
GAAGAGTTTG AAGCACTTAT GCCACAAAGC ATCTTTGTTT CAGCGACGCC AAGTGATTAT
GAAATTGATA AGTCTGATGG GGAGATTGCC GAGCAGGTTG TGAGACCGAC TGGTCTGCTT
GATCCTGAGA TTGAAGTGAG GCCTGTTGGT ATTCAAGTTG ATGATTTGCT TTCAGAAATT
GGCAAGCGAG TCGCAGTGAA TGAGCGTGTG TTAGTCACAA CACTGACTAA ACGTATGTCT
GAAGATCTCA GCGAGTATCT TGATGAGCAC GGTGTTAAAG TCAGATATTT GCATTCAGAT
ATTGATACCG TTGAGCGTGT TGAAATCATT CGTGACTTAA GATTGGGTGT ATTCGATGTA
CTTATCGGTA TCAACTTGCT ACGAGAAGGC TTAGATATGC CTGAGGTATC TTTAGTCTGT
ATTCTCGATG CCGATAAAGA AGGTTTTTTA CGTTCTGAGC GCTCACTTAT TCAGACTATC
GGTCGTGCGG CGCGAAACAT CAACGGTAAG GTGATCCTTT ACGGCGATCG AATCACTAAG
TCGATGGATA AAGCGATAAC TGAAACTAAT CGTCGTCGTG AAAAACAGCA TCAATACAAT
TTAGATAATG GCATCACACC TAAAGGTGTG GTTAAGCGCA TTACTGATGT TATGGACGTT
GGCGATCATC AATATGTCGA TAGTGAGCGA GGCGTAGCGG AGAAAGAAGG GGGTTACCAT
GTGGCTAAAC CTGCAGACAT CAGCCATGAC ATTGATAGGC TTGAAAAGCA GATGCATGAG
CATGCTAAGA ACCTAGAGTT TGAAGAAGCT GCAGCTGTTC GCGATCAAGT CAGCCGACTC
AGAGAGCAGT TTATAAAGGC TTAG
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| Protein sequence | MSESVFQLES MYKPAGDQPT AINKLVEGLE SGVACQTLLG VTGSGKTFTV ANVIAKMSRP
TIIMAPNKTL AAQLYGEMKE FFPHNAVEYF VSYYDYYQPE AYVPSTGTFI EKDASVNAHI
EQMRLSATKA LLERKDVVLI ASVSAIYGLG DPKAYMKMLL HLREGGNMEQ RDILKRLSEL
QYTRNDIELQ RGTYRVRGEV IDIFPADSDK NAIRIELFDD EIERLSLFDP LTGHVVKRIA
RITVYPKSHY VTPRESILAA TEDIKQELRD RKKQLLELNK LIEEQRITER VQYDVEMMTE
LGYCSGIENY SRYLSGRAPG DGPPTLLDYL PDDGLLIIDE SHVTVPQIGA MYKGDRSRKM
NLVEYGFRLP SALDNRPLKF EEFEALMPQS IFVSATPSDY EIDKSDGEIA EQVVRPTGLL
DPEIEVRPVG IQVDDLLSEI GKRVAVNERV LVTTLTKRMS EDLSEYLDEH GVKVRYLHSD
IDTVERVEII RDLRLGVFDV LIGINLLREG LDMPEVSLVC ILDADKEGFL RSERSLIQTI
GRAARNINGK VILYGDRITK SMDKAITETN RRREKQHQYN LDNGITPKGV VKRITDVMDV
GDHQYVDSER GVAEKEGGYH VAKPADISHD IDRLEKQMHE HAKNLEFEEA AAVRDQVSRL
REQFIKA
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