Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2343 |
Symbol | |
ID | 5662736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2854760 |
End bp | 2855239 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641236953 |
Product | SecC motif-containing protein |
Protein accession | YP_001502198 |
Protein GI | 157962164 |
COG category | [S] Function unknown |
COG ID | [COG3012] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.426632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAAACC ATAACATTGA AGCCGAATCC TTATGCCCTT GTTGTTCAGG GCTATCTTAT CAGTCTTGTT GCCAACCATT TCACCTTAAG ACGCAAATAG CACAAAATCC CGAGCAGTTA ATGCGCTCTA GATTTAGTGC TTTTTATCTA AACAAATTTG CATATCTGAT TGAAACTCAT CACCCAGACT TCTTAAATGG CCTCACAGAA CAAAACCTTG CACAAGAACC ACTGCCAGAT TGGTTAGGTC TTGAAGTGAA GTCTGCAAGT GAAGATGGCA ATCAGGGGCG TGTAACTTTT CAAGCTTGGT ATCAATTAGA CAATGAGCTA GATGCAATAC ATGAATGTTC TGATTTCATT AAGCTGGAAG GTAAATGGTT TTACACCAAG GGGGAACAAA AGGCTGCCGT TTTCCCTAAA CGTAATGATA AATGTGTGTG TAACAGCGGT AAGAAGTTTA AGCAGTGTTG CGGTCAGTAA
|
Protein sequence | MTNHNIEAES LCPCCSGLSY QSCCQPFHLK TQIAQNPEQL MRSRFSAFYL NKFAYLIETH HPDFLNGLTE QNLAQEPLPD WLGLEVKSAS EDGNQGRVTF QAWYQLDNEL DAIHECSDFI KLEGKWFYTK GEQKAAVFPK RNDKCVCNSG KKFKQCCGQ
|
| |