Gene Spea_2343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2343 
Symbol 
ID5662736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2854760 
End bp2855239 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content40% 
IMG OID641236953 
ProductSecC motif-containing protein 
Protein accessionYP_001502198 
Protein GI157962164 
COG category[S] Function unknown 
COG ID[COG3012] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.426632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAACC ATAACATTGA AGCCGAATCC TTATGCCCTT GTTGTTCAGG GCTATCTTAT 
CAGTCTTGTT GCCAACCATT TCACCTTAAG ACGCAAATAG CACAAAATCC CGAGCAGTTA
ATGCGCTCTA GATTTAGTGC TTTTTATCTA AACAAATTTG CATATCTGAT TGAAACTCAT
CACCCAGACT TCTTAAATGG CCTCACAGAA CAAAACCTTG CACAAGAACC ACTGCCAGAT
TGGTTAGGTC TTGAAGTGAA GTCTGCAAGT GAAGATGGCA ATCAGGGGCG TGTAACTTTT
CAAGCTTGGT ATCAATTAGA CAATGAGCTA GATGCAATAC ATGAATGTTC TGATTTCATT
AAGCTGGAAG GTAAATGGTT TTACACCAAG GGGGAACAAA AGGCTGCCGT TTTCCCTAAA
CGTAATGATA AATGTGTGTG TAACAGCGGT AAGAAGTTTA AGCAGTGTTG CGGTCAGTAA
 
Protein sequence
MTNHNIEAES LCPCCSGLSY QSCCQPFHLK TQIAQNPEQL MRSRFSAFYL NKFAYLIETH 
HPDFLNGLTE QNLAQEPLPD WLGLEVKSAS EDGNQGRVTF QAWYQLDNEL DAIHECSDFI
KLEGKWFYTK GEQKAAVFPK RNDKCVCNSG KKFKQCCGQ