| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2340 |
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| Symbol | |
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| ID | 5662733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2851374 |
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| End bp | 2853212 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236950 |
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| Product | peptidyl-dipeptidase A |
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| Protein accession | YP_001502195 |
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| Protein GI | 157962161 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.215134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA GCCTAGTTAA GGTTTCTAAA CTTTCGGCAG TGATTGCGCT AACACTTGGC
GTTTCAGCTT GTAGTAAAAT AGAGGCTGAG AGTAAGCCTG TCACAGTTGA TAAAACTATA
GAAGCTAAAC AGTTTATCAA GGATGCTGAA TCTAAAATGG CCGATCTCTC TATTGAGATT
AATCGCTCTG AGTGGATCTA TAGCAATTTT ATCACCCAAG ATACTGCGGC ACTGGCAGCC
AGTGTTTCTG AAAAATATAC CGCTGCATCG GTAGAGCTCG CGACTACATC GGCGCAATTT
GCCAATCTTC CATTAAGTGA CGCTGAAAAA CGTAAACTCA ATATACTTCG TAGTTCTATC
GTACTCCCAG CTCCACTCGA TGTGGTAAAA AATGCCGAAC TGGCCAATAT TAGTGCCGAG
CTAAACGGTC TATACGGTAA AGGAAAATAT TGTTTCGAAG ATGGTCACTG CCTAACTCAG
CCTGAACTGT CTGCCATTAT GGGAACATCA ACTAATCCAG ATGAGCTTTT AGAGGTGTGG
CAAGGCTGGC GTGAAATAGC CAAACCTATG CGTCCGCTTT TTGAAAGAGA AGTGGAGCTT
GCAAATGAAG GGGCCAAAGA TCTGGGTTAC GCAGATCTCT CTGAGCTTTG GCGTAGTAAC
TACGATATGA AGCCTGACGA GTTTTCCACT GAACTTGACC GATTGTGGGG GCAAGTTAAA
CCTTTATATG ATTCGCTACA CTGCTATGTT CGTGGTGAGC TAAATGAGCA GTATGGTGAT
GATGTGGCAC CAGCATCTGG AGCTATACCA GCCCATCTAC TCGGCAATAT GTGGGCACAA
AGCTGGGGCA ATATTTATGA GCAAGTCGCG CCAGAAAATG CCGATCCTGG ATATGATGTC
ACTGAGCTGT TAGCCAAGCA TAACTTTGAT GAGATAAAAA TGGTTGAGCA GGCCGAGACC
TTCTTTACTT CTCTTGGCTT CGAGCCACTA CCTGACACAT TCTGGGAACG TTCTTTATTC
GTCCAGCCTG AGGATCGCGA TGTGGTTTGT CACGCATCGG CCTGGGATCT CGATAGTCGC
GACGATATCC GCATAAAGAT GTGTATTCAG AAGACCGCCG AAGACTTTAC CGTAATTCAT
CATGAGCTTG GGCATAACTT CTATCAACGC GCTTATAAAG ACCAACCGTT TATCTTTAAA
AATAGCGCCA ACGATGGTTT CCACGAGGCG ATTGGCGATA CTGTTGCCTT ATCGATTACG
CCAGATTACT TGAAGCAAAT TGGATTACTT GACGAAGTCC CTGATGCGTC CAAAGATATT
GGGCTACTAC TCAAGCAAGC ATTAGATAAG GTGGCGTTTT TGCCATTTGG TTTGATGATT
GACCAATGGC GCTGGAAGGT CTTTAGCGGT GAAATCACAC CTGAACAATA TAATAAAGCA
TGGTGGGAAC TTCGCGAAAA ATACCAAGGT GTGAAAGCTC CTATCGCCCG CAGCGAAGCA
GACTTCGACC CAGGTGCTAA GTATCACGTG CCCGGTAATG TGCCCTACAC GCGCTATTTC
TTAGCGCATA TTCTGCAATT CCAATTCCAT CAATCCCTAT GTGAGATTGC TGGTGATAAC
GGCCCAGTTC ATAGATGCAG TATTTATGGC AACAAGGAAG CCGGAGCAAA ACTCAACACC
ATGCTAGAAA TGGGGCAAAG CAAGCCTTGG CCTGAGGCGT TAGCGGCAGT AACTGGCACT
AAAGAGATGG ATGCCAAAGC CGTACTCGAT TACTTTGCGC CACTGCAAAC TTGGTTAGAT
GAGCAAAACT CCACTGCAAA TCGTCAATGT GGCTGGTAA
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| Protein sequence | MSKSLVKVSK LSAVIALTLG VSACSKIEAE SKPVTVDKTI EAKQFIKDAE SKMADLSIEI
NRSEWIYSNF ITQDTAALAA SVSEKYTAAS VELATTSAQF ANLPLSDAEK RKLNILRSSI
VLPAPLDVVK NAELANISAE LNGLYGKGKY CFEDGHCLTQ PELSAIMGTS TNPDELLEVW
QGWREIAKPM RPLFEREVEL ANEGAKDLGY ADLSELWRSN YDMKPDEFST ELDRLWGQVK
PLYDSLHCYV RGELNEQYGD DVAPASGAIP AHLLGNMWAQ SWGNIYEQVA PENADPGYDV
TELLAKHNFD EIKMVEQAET FFTSLGFEPL PDTFWERSLF VQPEDRDVVC HASAWDLDSR
DDIRIKMCIQ KTAEDFTVIH HELGHNFYQR AYKDQPFIFK NSANDGFHEA IGDTVALSIT
PDYLKQIGLL DEVPDASKDI GLLLKQALDK VAFLPFGLMI DQWRWKVFSG EITPEQYNKA
WWELREKYQG VKAPIARSEA DFDPGAKYHV PGNVPYTRYF LAHILQFQFH QSLCEIAGDN
GPVHRCSIYG NKEAGAKLNT MLEMGQSKPW PEALAAVTGT KEMDAKAVLD YFAPLQTWLD
EQNSTANRQC GW
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