Gene Spea_2339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2339 
Symbol 
ID5662732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2850544 
End bp2851191 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content44% 
IMG OID641236949 
ProductTetR family transcriptional regulator 
Protein accessionYP_001502194 
Protein GI157962160 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.519522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAATC GCTCCGATAC AAAAACAAGA ATACTGGATG CTGCGGAAAA ATTATTTGCA 
GAAAGAGGTT TTTCAGAAAC CTCACTAAGA CTAATTACAA GTAAAGCTGA AGTAAACCTT 
GCATCTGTGA ATTACCATTT TGGCTCTAAA AAGGAGCTGA TCCGGGCGGT ACTCGCACGT 
TACCTCGATG TGTTTATGCC AGCTGCCGCC GAGGCCATTG TTGCTGTGCG TAGTAATAAT 
GCGAACGCAT CCTTAGACGA CATCTTTTCG ACCTTGGTGG CACCTTTACT CGATCTTAAT 
AGCTTGAGAG CGGAAGGGAC TACGACCTTC TTGCAATTAT TAGGGCGTGG TTACATTGAA 
AGCCAAGGTC ACCTCCGTTG GTTTATCACC ACACACTATG GAGAATACTT AGGGTTATTC 
GTTAAGGCTG TCGCCGAAAG TGCACCACAT ATTCCTCCCG CAGAGATGTT TTGGCGATTA 
CACTTTACCT TAGGTACGAT TGTTTTCACC ATGGCGTCAG CCGATGCATT AACAGAAATT 
GCAGAAGCTG ATTTTGGGGA GCAAAATGAT ATTGAAGCTG TTATCAGAAA AGTCATTCCG 
TATTTGTCTG CCGGAGTGTC CGTTCCACTT ACTAAGGATG TAATGTAA
 
Protein sequence
MANRSDTKTR ILDAAEKLFA ERGFSETSLR LITSKAEVNL ASVNYHFGSK KELIRAVLAR 
YLDVFMPAAA EAIVAVRSNN ANASLDDIFS TLVAPLLDLN SLRAEGTTTF LQLLGRGYIE 
SQGHLRWFIT THYGEYLGLF VKAVAESAPH IPPAEMFWRL HFTLGTIVFT MASADALTEI 
AEADFGEQND IEAVIRKVIP YLSAGVSVPL TKDVM