Gene Spea_2333 details

Gene Information

• Locus tag: Spea_2333
• ID: 5662726
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: -
• Start bp: 2841357
• End bp: 2843183
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 641236943
• Product: phosphogluconate dehydratase
• Protein accession: YP_001502188
• Protein GI: 157962154
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR01196] 6-phosphogluconate dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.480587
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACAGCG TTGTACAATC TGTTACTGAC AGAATTATTG AACGAAGCAA AGATTCTCGC 
GCTAAGTATT TAGCGGCGCT CGATGATGCT AAAAATAAAG GCGTTCACCG TAGCGCACTG 
AGTTGCGGTA ACTTAGCTCA CGGTTTTGCA GCTTGTAACC CAAGCGACAA GTCCGACATA 
AAGCAGTTAA ACAAAGCAAA TATCGGTATT ATCACTTCTT TTAACGACAT GTTGTCTGCT 
CACCAACCAT ACGGTGCGTA CCCAGACTTG TTGAAACAGG CTTGTAACGA AGTCGGTAGT 
GTTGCACAAG TTGCAGGCGG CGTTCCTGCT ATGTGTGATG GCGTGACCCA AGGTCAGCCT 
GGCATGGAGC TTAGCCTGTT AAGCCGTGAA GTGATTGCCA TGGGAACAGC GGTAGGTCTA 
TCCCATAACA TGTTCGACGG TGCTTTGCTG CTAGGTATTT GCGACAAGAT TGTACCGGGT 
CTGTTGATTG GTGCACTGAG CTTTGGCCAT TTGCCTATGC TATTTGTACC TGCTGGCCCG 
ATGAAGTCGG GTATTCCTAA TAAGGAAAAG GCGCGTATTC GTCAAAAGTA TGCCCAAGGC 
GAAATCGACA GAGCGGCATT GTTAGATGCT GAGTCTAAGT CTTATCACAG TGCGGGTACT 
TGTACTTTCT ACGGCACGGC CAACAGTAAC CAGTTGATGC TAGAGGTGAT GGGACTTCAA 
TTACCTGGCT CATCTTTTGT TAATCCAGAC GATCCGCTAC GTGAAGTCTT GAGCAAGACA 
GCCGCTAAGC AGGTTTGTCG TCTAACCGAA ATGGGTACTC AATATACGCC AATCGGTAAA 
GTCGTATCTG AAAAATCAGT GGTTAACGGT ATCGTTGCAC TATTGGCAAC GGGTGGCTCG 
ACTAATCTGA CCATGCACAT AGTGGCCGCG GCTCGCGCTG CTGGCATTAT CGTCAACTGG 
GATGATTTCT CTGAGCTTTC AGATGCAGTG CCGCTACTAG CACGTGTGTA TCCAAACGGT 
CACGCCGATA TTAACCACTT CCACGCTGCT GGCGGTATGG CGTTCTTAAT AAAAGAACTG 
CTGGACGGCG GCTTACTTCA TGAAGATGTC GATACAGTCG CAGGTTTTGG TCTTAAGCGT 
TATACCCAAG AGCCGCAAAT CCGTGATGGC GAGCTTAAAT GGGTCGATGG TCCGCAAACA 
AGCTTAGATA ACGAAGTGCT AACGGGGCTT AACACGCCGT TCCAAAACAA CGGTGGCCTA 
AAGCTGCTTA AAGGTAATCT GGGCCGCGCG GTGATTAAAG TGTCTGCAGT GGCTGAGCAA 
CATCGAGTTG TTGAAGCGCC AGCAGTGGTG ATTGACGATC AAAACAAGCT TGAAGCTATC 
TTTAAAGCGG GTGATTTAGA TAAAGATTGC GTGGTGGTAG TAAAAGGTCA AGGACCAAAA 
GCCATCGGCA TGCCGGAGCT ACATAAGCTC ACTCCTATCC TTGGTACGCT ACAAGATAGA 
GGCTATAAGG TCGCTCTACT GACTGACGGC CGTATGTCAG GCGCGTCTGG CAAGGTGCCT 
GCAGCCATTC ATTTAACGCC AGAGGCGTTA GATGGCGGTC TAATCGCTAA GATCCACAAT 
GGTGATTTAG TTCGAGTCGA TGCGACAACG GGTGAACTGT CTCTGCTAGT CGATGAGGCC 
GAGCTTAATG CAAGAGCTGC CGATAAAGTC GATCTGCAAA GAACAAGTTA TGGAATGGGA 
CGAGAGCTTT TCGGTGCACT GCGCGCAAGC TTAAGCAGTC CAGAAACTGG TGCGCGATGC 
ACTAGTGCTA TTGATGAACA CTATTAA 

 

Protein sequence

MHSVVQSVTD RIIERSKDSR AKYLAALDDA KNKGVHRSAL SCGNLAHGFA ACNPSDKSDI 
KQLNKANIGI ITSFNDMLSA HQPYGAYPDL LKQACNEVGS VAQVAGGVPA MCDGVTQGQP 
GMELSLLSRE VIAMGTAVGL SHNMFDGALL LGICDKIVPG LLIGALSFGH LPMLFVPAGP 
MKSGIPNKEK ARIRQKYAQG EIDRAALLDA ESKSYHSAGT CTFYGTANSN QLMLEVMGLQ 
LPGSSFVNPD DPLREVLSKT AAKQVCRLTE MGTQYTPIGK VVSEKSVVNG IVALLATGGS 
TNLTMHIVAA ARAAGIIVNW DDFSELSDAV PLLARVYPNG HADINHFHAA GGMAFLIKEL 
LDGGLLHEDV DTVAGFGLKR YTQEPQIRDG ELKWVDGPQT SLDNEVLTGL NTPFQNNGGL 
KLLKGNLGRA VIKVSAVAEQ HRVVEAPAVV IDDQNKLEAI FKAGDLDKDC VVVVKGQGPK 
AIGMPELHKL TPILGTLQDR GYKVALLTDG RMSGASGKVP AAIHLTPEAL DGGLIAKIHN 
GDLVRVDATT GELSLLVDEA ELNARAADKV DLQRTSYGMG RELFGALRAS LSSPETGARC 
TSAIDEHY