| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2326 |
|---|
| Symbol | |
|---|
| ID | 5662719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 2834856 |
|---|
| End bp | 2836499 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641236936 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_001502181 |
|---|
| Protein GI | 157962147 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.995391 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTATCAC GTCTTAGAAA TCTAAATAGT ATTCAATTCA CACTTATACT TGCGATTTAT
TATGTGTGCG TACTTAATAT TCCGCTTTTT CAAATTATCA AACAGGGCGT GGATAAACAA
GCCGATGTGA ATATGGCCTT TATTGCGACC ATGCCTTTTT TTCTGTTATT TGCACTGTCT
TTTTTATTTA GTATTTTTAG TGTGAAGTAC CTGGCAAAGC CATTCTTCAT CATTCTGACC
CTGATATCAT CGAGTGTGTT TTTTGCCGCT TTTCAATATG GAGTGGTTTT TGACTACGGC
ATGATTGAAA ACACCGTTCA GAGCAATCAA TCGGAGGCGG CGACCTACCT TAATTGGGCA
TCTGTCCTCA ATTTCGCTGT GACGGGGCTA ATACCTTGCT TGCTTATATA TAAAGCCAAT
ATTCAATACA AACCCTTTAG TAAGGAGTTA CTGCATAAGG CCGTGTTTAT GCTGTCTATG
CTCGCGGGCA TAGTGGTGAT AGGCATGTTC TATTATCAAA ACTACGTCTC TTTTGGCCGT
AATAACGACA TCATTAAGCG TTATGTTATT CCTACCTATT TTATTGGTTC TACCGCCAAG
TACATTGATG TCAACTATCT GCAACAGCCG CTTGAGTATA AACAGCTTGG CCTAGATGCG
AAAAATACCA CGGCTAAAAC TAATTCTAAA ACCCATCCGC AAACTAAGCC TAATTTAGTG
GTGCTGGTGG TCGGCGAAAC GGCAAGAGCG GCTAATTATC ATTACTATGG TTATGACAGA
CCAACCAATG CGCATACCAA AGTTCAAGGC TTAATCGCAT TTCAAGATAC GCACTCTTGT
GGCACTGCAA CCGCAGTCTC TTTACCTTGC ATGTTTTCAA GAATGGATCA TAAAAATTAC
GACTCTCGTC GTGCAATGGC TCAAGATAAT GTCATCGACA TACTGAATCA TGCAGGCATT
CAACTCGAAT GGCTCGATAA TGACAGCGGC TGTAAAGGGG TTTGTCAGAA CATAGAGCAT
GTGGTTATCG ACCATAACAG CGATCCCAAG CTATGCAACG GCGAATTTTG TTATGACCAA
GTCTTAATAA ATGAGCTGGA TAAACGCCTT AAGACGATTG AGCGAAAAGA CACCTTGCTG
GTGCTGCATA TCATTGGCTC CCATGGGCCG ACATACTATC TGCGTTACCC TGAGCAACAC
CGGCGCTTTG TACCTGACTG TCAGAGAAGT GATATTCAAA ACTGTACTCA CCAACAGCTG
GTTAACACCT ATGACAATAC GATTTTGTAC ACAGATTATA TTGTGTCACA GGTGGTCAAA
GAACTAGAGG GGGAGAGTAA GCAATTTGAC ACTGCAATGC TTTATATCTC GGATCACGGT
GAGTCATTAG GGGAAAGCGG TATGTATCTT CATGGTACGC CGTATTCATT TGCGCCAGGT
GAGCAGACTA AGGTGCCTTT ATTAGCTTGG ATCTCTAACG GATTCGCCGA ACAAAATCGT
CTGGATCTAA CCTGCCTAAA TAAAGAAGCG GCTAAGGGAG GTTTTTCCCA TGATAACTTG
TTCGATAGCT TACTTGGCTT GATGAATGTG AAAACCAGTA TATATCGCCC AAGTACCGAT
ATTTTCTTGG GTTGTAGGAA ATAA
|
|---|
| Protein sequence | MLSRLRNLNS IQFTLILAIY YVCVLNIPLF QIIKQGVDKQ ADVNMAFIAT MPFFLLFALS
FLFSIFSVKY LAKPFFIILT LISSSVFFAA FQYGVVFDYG MIENTVQSNQ SEAATYLNWA
SVLNFAVTGL IPCLLIYKAN IQYKPFSKEL LHKAVFMLSM LAGIVVIGMF YYQNYVSFGR
NNDIIKRYVI PTYFIGSTAK YIDVNYLQQP LEYKQLGLDA KNTTAKTNSK THPQTKPNLV
VLVVGETARA ANYHYYGYDR PTNAHTKVQG LIAFQDTHSC GTATAVSLPC MFSRMDHKNY
DSRRAMAQDN VIDILNHAGI QLEWLDNDSG CKGVCQNIEH VVIDHNSDPK LCNGEFCYDQ
VLINELDKRL KTIERKDTLL VLHIIGSHGP TYYLRYPEQH RRFVPDCQRS DIQNCTHQQL
VNTYDNTILY TDYIVSQVVK ELEGESKQFD TAMLYISDHG ESLGESGMYL HGTPYSFAPG
EQTKVPLLAW ISNGFAEQNR LDLTCLNKEA AKGGFSHDNL FDSLLGLMNV KTSIYRPSTD
IFLGCRK
|
|---|
| |