Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2298 |
Symbol | |
ID | 5662691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2787978 |
End bp | 2791259 |
Gene Length | 3282 bp |
Protein Length | 1093 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641236908 |
Product | histidine kinase |
Protein accession | YP_001502153 |
Protein GI | 157962119 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTACGCG GATACCTTCT AATATTAATC AAGCCCCTGC TTAGTGTCTG TGTAACAGAT AACGAGAGAG TTTATTTGTA TATTATTCTG AACAGAATTC GGTCGAGTTT TACATATATC CTGACTGTCA CGTCAATTGT TGCCATCTGC CTGATTCCCA AGCTGGGCCA CGCTTTTTCA AGTTTGGAGA CTAGCCGTAT AGGCCTTAGT AGCGGCTTGG AAGAAGACAT TATTTTAGCC CTGCTGATCG ATCATCAAGA CTTTATGTGG GTAGGGACTA AAAATGGACT GTTTGTCTAT GATGGCTACC AAGTACAGAA ACATATTCCA CAACCCAGCG CCCCCAATAG CCTTAGTGCG TTAGATATTC GCAATATCTA TCAAAGCAGT GATCACACTA TCTGGGTTTC AACAAATAGC GGTGGGTTGA ATAAATATGT GCCACAAAGC AATACGTTCG TCCATTATCG TCATCAATCA GAACAACAAA ATAGCATCAG TAATGACAGT GTATATGATG TGGTAGAAGG ACCTGATGGG CACCTATGGA TTGCGACTCA GATAGGCTTA AACAGATTAA ACCGCAGCAC AGGCGAGATA ACGCGCTTCT ATCATGAAGC CAGTGATCCC ACTTCATTAC CCAATGATTA TGTATACCGG CTCTTCTTAG ATAGTAAGCA GCGGTTGTGG CTTGGCACCA TTGGCGCGGG GCTCGCTTAT TGGGACAGTG CAGAACAAGC GTTTATTCGA GTCCCGCTGC CAGCAGGCGG ACATGACGAT ATATTTGCCA TCACTGAAGA TACGAGTCAA AACCTATGGA TCGGGAGTCG TAATGGCTTA CTAAAGATGG GTCCACAGCG CGATAATGTC GAGCAGATCT ATTTAACGCC CTCTTCTGCA CAGCAGCCAC TTATCATCAA GCTTCACTTG ACCCAAAAAA ACACCCTCGC GATTGGCACC AGTGGCTACG GCCTTATGAT ATTAGATCTC ACTAACAACC AGCTAGTTAG CGAGTATAAA AAGCCGCAAG CCGCTAAAGG AACCGCCACT AGCATAGTTG AAAACTCGCA AGGCACGCTT TTTGTCGGCA CTTGGGGCGC AGGAATTCAG CGAATCGAGC CGAAAGTTCC CTACGTTTCA TTGATCACTA AACCCGATAA TAAAGCACTC CCAGCCATCA GAAACATTAG CGCGCTTTAC ACTGACCAGA CTAATAACAA AACCTGGGTC GGCACATCAG GCACAGGCTT GCATTGGTTA GATCAAGACT CGGGGCAGAT TTTAAAGGTG CAGTCCCCAC TTGCACAACA TTTAGTCGAA GGTGTACACA GCATCACCCA GCTAAGCAAT GGACAGCTCT ATGTGGGGAC ATCTCAAGGC TTGTGGCAAT TATCGGCACA AGGTGAAACC TTAGCTTTCT TTAGGCACGA GCCGACTAAT CCAAATTCTA TCGGCAAAGG TTATGTCAGG GTCATAGAGC CTGCATTAGA TGGAAACTTA TGGATTGGTG TTGGTGGCAC CGGGCTACAC CACTTCAATC CCAGCACAGG AAAGTTTACC GCCTATCGGC ACCAGAGTAA CAATAAAGAA TCTATCAGCG GCAATTACAT CACCTCCCTC CTCGTCAATG GTGATGAGAT CTGGGTAGGA ACTCGCTCAA GTGGCCTAAA TCGATGCCAG ACACGCAATT GGCGTTGCCA GCGGTTTAAA CCAAACTCTG AACTTGAACA ACCACTGAGC CATTTCTATA TCACAGATCT CGCCATCGAC AGCAAACAGC AGATTTGGGT CGGAACCGAC GGCGGTGGCT TAAGTAAAGT TGTATTTGAT AGCGACAATA AGGTTGAAGC ATTCCAAGCC GTGAGCAAGC ACCTTGGATT TGTGGGGCAA AGCATCATCT CAATTACACC TGAGTCCGAT GGCAATTTAT GGCTAACAAC AAAGAAAGGT ATTTCGTTTT TTAACCCATC TCGACAGACG GCCTTTAATT TAGGCGATGA TCAACTTTTT CATGTCGGTA GTTTTTCACA AAATGCCCGC TCACAGAGTA GCGAGTACAG TTACTTTGGT GCCATCAATG GGGTTATTCG TATTGAGCGC AACCGAGTGA TAACTCCAGA GCTCCCCGCC CCGATCAAGT TTACCAAAAT TGAACATGAG TCTTTGCCCA TACCACTAAT GAATATTGGT ATCGCGAGCG ATCTTGAGCT AGCTCTACCT TGGGGCGAAG TCCTCACTTT AGAGTTTTCA TTATTAGATT TTTCCGAGAA GAGTCATGAC TATGAATATC GTTTGACGCC ATCAAGCCCA TGGCAGAGTT TAAACAACCG AAAACACATG ACATTTTTTA ATCTAGACCC AGGTTTTCAC CCGCTTGAAG TCAGAGGAAA AGGGAATAAT GGCCAATGGA GTGAGCCCGC CAAACTCAAT GTTCAGATAG TGCCACCTTG GTGGATGAAA ACTTGGGTCA GAATCGCATT TATCTTCGTC ATCATACTGA TGTTTATCGC ATTTCATAAA ATGCGGATTG CCCGTTGGAA GAAACACTCG GCGCGACTAC AGGCGCTGCA AGAGCAGAAG CAGATTGCAC TCGATGACGT TAAAAGTCGT GAACAGCAAC TGAGTACAGC CTATCAAGGA CTTAGAAGTC TAGCGACTCA AATACAAAAT GCTAAGGAAG AAGAGCGAAA ATCCATTTCA AGAGAGTTAC ATGATCAGTT TGGACAAACG TTAACGGCCA CAAAAATCAA TCTTCAGCTC TATAAAAAGT TTAACTATCA AGAACAAGAG CGCATAGATT CAGCCATATC AATTACCCAT ACTATGATCC AACAGATGCG GGCCATCTCT TTCAATTTGC GCCCCGCTCT CTTGGATGAT GAAGGCCTAG TCGCAGGGGT TAAGCTTCAA CTCGAAAAGA TGTCAGCCTT AATTGCTAAC CCAATCGAGT TCAGCGTTAG CAGTGATTTT CCCATCGTTA ATCAAGGGAT CACCATTAAT GTATTTCGGA TCATCCAAGA GTCGGTCAAT AACGCCATTC GACATGCTGA TGCCAAGCAA ATTTGTGTCA GCCTCATCTA TCATAGCGAA CAATTACTCA TCGAAATAAA AGACGACGGT AAAGGATTTG ATGTCGAAAA AGCTAAGCAA AATACCTTTA GTGGCATCCA TCTAGGACTA CTCGGTATGG AAGAGCGTGT GCATTCGTTA TCTGGAAAAT TGATGCTTCA CTCAAGTGTC ACAAATGGTT CAATAATTAA GGTGGTGATC CCTAATGTCT GA
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Protein sequence | MLRGYLLILI KPLLSVCVTD NERVYLYIIL NRIRSSFTYI LTVTSIVAIC LIPKLGHAFS SLETSRIGLS SGLEEDIILA LLIDHQDFMW VGTKNGLFVY DGYQVQKHIP QPSAPNSLSA LDIRNIYQSS DHTIWVSTNS GGLNKYVPQS NTFVHYRHQS EQQNSISNDS VYDVVEGPDG HLWIATQIGL NRLNRSTGEI TRFYHEASDP TSLPNDYVYR LFLDSKQRLW LGTIGAGLAY WDSAEQAFIR VPLPAGGHDD IFAITEDTSQ NLWIGSRNGL LKMGPQRDNV EQIYLTPSSA QQPLIIKLHL TQKNTLAIGT SGYGLMILDL TNNQLVSEYK KPQAAKGTAT SIVENSQGTL FVGTWGAGIQ RIEPKVPYVS LITKPDNKAL PAIRNISALY TDQTNNKTWV GTSGTGLHWL DQDSGQILKV QSPLAQHLVE GVHSITQLSN GQLYVGTSQG LWQLSAQGET LAFFRHEPTN PNSIGKGYVR VIEPALDGNL WIGVGGTGLH HFNPSTGKFT AYRHQSNNKE SISGNYITSL LVNGDEIWVG TRSSGLNRCQ TRNWRCQRFK PNSELEQPLS HFYITDLAID SKQQIWVGTD GGGLSKVVFD SDNKVEAFQA VSKHLGFVGQ SIISITPESD GNLWLTTKKG ISFFNPSRQT AFNLGDDQLF HVGSFSQNAR SQSSEYSYFG AINGVIRIER NRVITPELPA PIKFTKIEHE SLPIPLMNIG IASDLELALP WGEVLTLEFS LLDFSEKSHD YEYRLTPSSP WQSLNNRKHM TFFNLDPGFH PLEVRGKGNN GQWSEPAKLN VQIVPPWWMK TWVRIAFIFV IILMFIAFHK MRIARWKKHS ARLQALQEQK QIALDDVKSR EQQLSTAYQG LRSLATQIQN AKEEERKSIS RELHDQFGQT LTATKINLQL YKKFNYQEQE RIDSAISITH TMIQQMRAIS FNLRPALLDD EGLVAGVKLQ LEKMSALIAN PIEFSVSSDF PIVNQGITIN VFRIIQESVN NAIRHADAKQ ICVSLIYHSE QLLIEIKDDG KGFDVEKAKQ NTFSGIHLGL LGMEERVHSL SGKLMLHSSV TNGSIIKVVI PNV
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