| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2282 |
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| Symbol | |
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| ID | 5662675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2763910 |
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| End bp | 2764911 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641236892 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001502137 |
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| Protein GI | 157962103 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.049005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CCATTATCTC TACATTACTC GGTAGCACAT TAGCGTTATC TTCTGGGGCG
GCATTTGCTA AAGATGACAT TAAAATAGCG GTGTTAATGT ACGGTATGAA GGCTGAATTT
GTGCAACTTA TGCAGCAAGC AGCCTACGAC CACCCGTTAG TAAAATCGGG TGAAGTTAAG
ATCACTATGT ATGATGGTCG CTATGACGCG TTAGTGCAAA ATAACCAGGC TGAAACGGCT
ATTCGTACCA ACCATGACGC AATCATCATT AACCCGATGG ATTTCGATGC CAATATTGAT
GTTGTGGATA TGGCTAACGA CGCTGGTATT CCCGTTATCG TTACCAATGC GCGTTTAAAT
ACCGATCAAA TGACCGCTGA AGTGGTTTCT GACGACGTTG AAGGTGGTTA CTTAGAAGCT
AAGTTTATAA TGGAACAAAT TGGCTGTAAG GGTAATGTGG TTATTCTTGA AGGACCAAAG
GGTGGCTCTG GTGAGATCCA GCGTGGTCAG GGTAATGAAA AAGCCATCGC TGAATGTCCA
GAAGGAGCGG TTAAGGTACT TGAGCGTAAG ACGGCTAACT GGTCTCGCGC CGAAGGTATG
ACCTTGATGG AAAACTGGTT AATGAAGCAT CAGGGTAAAA TCAGTGGTGT GATTGGTCAA
AATGATGAAA TGGCACTCGG TGCAATTGAA GCGATTGAAG GCACAGGTGA CTCAGTTGAT
AACTATGTTA TTGCCGGTAT TGACGGCGTA ACCGATGCTT TGCATGCAGT AAAAAGTGAT
AAAATGACTT CTATTCTGCA AGACGCAAAT GGCCAGATGC AAGGCTCTAT CGATGTGGCA
TTACGTCATA TTATCGGTGA GCAGTACAAG CCGACATCTA AGGTATGGCA GCAATATGCA
GATCAATTAA ATTGGAATAA TGGCCTGTCT AAACGCTATG ACATTCCTTG GACTGTGGTT
AATCAGCAGA ACGTTGATAA ACTGCTTGAA GTGCGTAAGT AG
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| Protein sequence | MKKTIISTLL GSTLALSSGA AFAKDDIKIA VLMYGMKAEF VQLMQQAAYD HPLVKSGEVK
ITMYDGRYDA LVQNNQAETA IRTNHDAIII NPMDFDANID VVDMANDAGI PVIVTNARLN
TDQMTAEVVS DDVEGGYLEA KFIMEQIGCK GNVVILEGPK GGSGEIQRGQ GNEKAIAECP
EGAVKVLERK TANWSRAEGM TLMENWLMKH QGKISGVIGQ NDEMALGAIE AIEGTGDSVD
NYVIAGIDGV TDALHAVKSD KMTSILQDAN GQMQGSIDVA LRHIIGEQYK PTSKVWQQYA
DQLNWNNGLS KRYDIPWTVV NQQNVDKLLE VRK
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