| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2268 |
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| Symbol | |
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| ID | 5662661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2745103 |
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| End bp | 2746461 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236872 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001502123 |
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| Protein GI | 157962089 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.012169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCATT CTGGCTTTCA AGCCAAACGC TTAGTCCAAT TAGCGCTACC AGTGCTTATT
GCCCAAGTCA CACAAACCAT GATGGGCTTT ATCGATACCG TTATGGCTGG GCGTGTTAGC
GCCGTCGATA TGGCCGCAGT AGCGATCAGT GCCAGTCTTT GGCTACCGGC ATTATTGTTT
GTTCAAGGCT TATTAATGGC CTTTACACCA GTATTTGCTC ACCATCATGG TGCCGATAAT
CAAAAAGCGA TTCAACCATT AGCTTTTCAA GCTGGTTATA TTGCCATAGT TGGTAGCCTT
GTTGTGGTGC TTATCCTCTC ATTTGCAGAG AATATTTTCA CCATGATGGA TCTTGAACCT
GAGATGGCAA GACTTGGCGT TGGTTACCTT AATGGCTTCA TGTGGGGCGT ACCCGCGTTC
GTACTTTATC AAGTATTAAG AGGCTGTAGC GAAGGGATCT CTTATACCTT ACCGACTATG
GTGATTGGTT TTGTCGGCCT AGCAGTCAAT ATTCCCGCAA ACTACATCTT TATATATGGT
CATTTTGGTG TGCCAGCAAT GGGCGGTGCA GGCTGTGGTA TAGCAACGGC GCTCGTGTTC
TGGGCCATGT TAATCGCCAT GGTGATCTAC ATGCAGCTGC ATAAAAAATT TAAAGAGCTG
GCACCGTTCA AATCTTTTCA CATGCCAGAC CTAAAAGTCA TGTTTGATAT GACAAAACAC
GGCTTCCCTA TCGCTATGGC GCTGTTCTTT GAAGTGAGTT TATTTGCAAT CATTGCGCTG
CTATTGGCCC CTTTAGGCGC CACAGTGGTA GCAGGACATC AGATTGCACT TAACTTTTCA
TCGATTGTAT TTATGTTACC GCTGTCGTTG GGTATCGCGG TTTCAATCCG CGTAGGCTAT
TACTTAGGCC AAGACAAGCC TGAAATCGCA GCGCTAGTCA CTAAGCTAGC ACTAATGATT
TCCTTTTCGT TAGCAGCATG CACTGCTGTG ATTACTATTT TATTTAGAAA CGAAATAGCG
CTGCTTTATA ATGATAATCC AGAGGTTATC ACCCTGGCGG GTAGCTTGAT GTTCTTTGCC
GCTATCTATC AATTATCGGA CTCAATACAA GTGGTTACCG CAGGTGCGCT ACGTGGTTAC
AAAGATACCC GCAGCGCATT TTATATCACA CTGGTTTCGT ATTGGGGTGT AGGTATGACC
TTAGGCTATA CCTTGGCTCG CACCGATATT ATTGTGCCGC ACATGGGCGC GCAAGGTTTC
TGGATTGGTT TGATTGCCGG TTTAACCGCT GCTGCAATTA TGTTTGCAGC TCGACTACGC
TACATTCAAA AACAGGGCGT TGTGCACTCA GCAATATAA
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| Protein sequence | MNHSGFQAKR LVQLALPVLI AQVTQTMMGF IDTVMAGRVS AVDMAAVAIS ASLWLPALLF
VQGLLMAFTP VFAHHHGADN QKAIQPLAFQ AGYIAIVGSL VVVLILSFAE NIFTMMDLEP
EMARLGVGYL NGFMWGVPAF VLYQVLRGCS EGISYTLPTM VIGFVGLAVN IPANYIFIYG
HFGVPAMGGA GCGIATALVF WAMLIAMVIY MQLHKKFKEL APFKSFHMPD LKVMFDMTKH
GFPIAMALFF EVSLFAIIAL LLAPLGATVV AGHQIALNFS SIVFMLPLSL GIAVSIRVGY
YLGQDKPEIA ALVTKLALMI SFSLAACTAV ITILFRNEIA LLYNDNPEVI TLAGSLMFFA
AIYQLSDSIQ VVTAGALRGY KDTRSAFYIT LVSYWGVGMT LGYTLARTDI IVPHMGAQGF
WIGLIAGLTA AAIMFAARLR YIQKQGVVHS AI
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