| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2265 |
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| Symbol | |
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| ID | 5662658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2743471 |
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| End bp | 2744208 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641236869 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001502120 |
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| Protein GI | 157962086 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00032435 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACTT GGGCATTAGT GACTGGCGCT GCAAAACGTA TCGGACTCGC AATTGCGACT
CAACTACATG ATGATGGTTA CAATGTAGTG CTCCACTACG GGCAATCGAT TGATGACGCC
CAGGCACTAT GCGACACGCT AAACACTAAG CGCGCCGACT CTGCAATCAT AATGCAGGCC
GACTTAGCCA ATAGCGATGC AATCGACACA CTAATCGCTA AAATAAACTC AGCTGGAATC
AGACTATCTG TACTTATCAA TAATGCTTCT TGCTTTTACC CTACTCCAAT AGGTGAAACC
TCTTTTATTA AAGCGCAGCA GTTGCTTGCG ACAAACCTCA TCGCGCCTTA TCTTTTGGCT
GAAAAGCTCA GCCCGCTACT TGAGGCCAAT AATGGTTGTG TGATTAACCT TTTGGATATC
CACGGCAGGC GCCCGCTAAA AGATCATGGA CTATACTCTA TATCAAAGGC TGCACTCGAA
ATGGCTACCT TGTCACTGGC TCAAGAACTC GCCCCCAATA TACGTGTTAA TGGCGTATCA
CCCGGTGCGA TTTTATGGCC AGAGCAATCC GGCGAACAAT CGCAACAAGC TATATTAAGT
GCTATCCCAC TGGCTAAGCT TGGCCAAGTT GATGATATTG CCAGGCTTAT TTCTCATTTA
GTGAGCGCGC CCTATATCTC AGGCCAAGTG ATTGCCGTAG ATGGAGGACG AAGCGCAGTA
GGTTTTATGG GAGCGTAA
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| Protein sequence | MTTWALVTGA AKRIGLAIAT QLHDDGYNVV LHYGQSIDDA QALCDTLNTK RADSAIIMQA
DLANSDAIDT LIAKINSAGI RLSVLINNAS CFYPTPIGET SFIKAQQLLA TNLIAPYLLA
EKLSPLLEAN NGCVINLLDI HGRRPLKDHG LYSISKAALE MATLSLAQEL APNIRVNGVS
PGAILWPEQS GEQSQQAILS AIPLAKLGQV DDIARLISHL VSAPYISGQV IAVDGGRSAV
GFMGA
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