Gene Spea_2248 details

Gene Information

• Locus tag: Spea_2248
• ID: 5662641
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 2726486
• End bp: 2726965
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 641236852
• Product: peptide methionine sulfoxide reductase
• Protein accession: YP_001502103
• Protein GI: 157962069
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0225] Peptide methionine sulfoxide reductase
• TIGRFAM ID: [TIGR00401] methionine-S-sulfoxide reductase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.423896
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTGG CAACATTCGG CGCAGGGTGT TTTTGGGGAG TTGAATACTT TTTCAGAGAA 
GTTGAAGGTG TCATTGACTG TACGTGCGGA TATATGGGCG GCAAAGACAG CTACACCCGC 
TACGCAGAAG TCAAAACGGG TACCACTGGT CACGCAGAGG TTGTGCAAGT GGAGTACGAC 
CCTAACATTG TGAGTTACCA ACGCTTACTG GAGGTTTTTT GGCAGAACCA CAATCCCACC 
ACATTGAATC AACAAGGTGG TGATATTGGT AGCCAGTATA GAAGCGCTGT TTTTTTTCAT 
GATAAACAAC AGAAGCATCA GGCCGAAGTT GCCAAATTAG CACTCATCAA AAGTGCAAAA 
TGGGGCTCAC GCCAGATAGT CACTGAAGTT GTACCTTGTC AGCAGTTTCA TCAGGCTGAA 
GCGTATCATC AAGATTACTT AGCTAAAAAT GAATTGCCTA GCTGTCATAT CAGTTATTAA 

 

Protein sequence

MALATFGAGC FWGVEYFFRE VEGVIDCTCG YMGGKDSYTR YAEVKTGTTG HAEVVQVEYD 
PNIVSYQRLL EVFWQNHNPT TLNQQGGDIG SQYRSAVFFH DKQQKHQAEV AKLALIKSAK 
WGSRQIVTEV VPCQQFHQAE AYHQDYLAKN ELPSCHISY