| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2245 |
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| Symbol | |
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| ID | 5662638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2722846 |
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| End bp | 2723823 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641236849 |
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| Product | transketolase central region |
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| Protein accession | YP_001502100 |
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| Protein GI | 157962066 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.38248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTCAGA TGAATATGTT GCAAGCCATT AACCAAGCCC TAAGCTCGGA AATGGAAGCG
GATAAAAAAA TGATGGTGTT CGGCGAAGAC GTCGGCCACT TTGGTGGGGT ATTTAGAGCA
ACTTCGGGCC TACAGGAAAA GTTTGGCCGT GAGCGTTGCT TCAATACACC GTTAACCGAG
CAGGGCATTG CCGGTTTCGC CAATGGCTTA GCCTCGAACG GCATGACGGC GGTGGCTGAA
ATTCAGTTTG CCGATTATAT CTTTCCTGCC ATCGATCAGA TAGTGAATGA GAGTGCCAAG
TTCCGTTACC GCAGCGGTAA CGAGTTTAAT GTTGGCGGCC TTACTTTTAG AACACCTTAC
GGCGGCGGTA TTGCAGGTGG TCATTATCAC TCGCAATCAC CAGAAGCCTA TTTTACCCAA
ACACCGGGTC TCAAAGTTGT CGTTCCACGT AACCCTGAGC AGGCAAAAGG GCTGTTAATC
GCCTCTATTC GTGATAAAAA CCCGGTGATA TTTTTTGAGC CAAAGCGCTT ATACCGTGCA
TCGGTGGGTG AAGTGCCTGA GGGCGACCAT GTTATCGAAC TCGGTAAAGC CGAAGTTATC
AAACAAGGTA CAGACATCAC CTTACTTGGC TGGGGCGCAC AGATGGAAAT CTTAGAAAAC
GCCGCAGAGA TGGCAGCGAA GAAAGGGATC TCCTGTGAAA TTATCGATTT AAGAACCTTG
TCCCCATGGG ATGTTGACAC GGTAGCAGCA TCGGTTAAAA AGACTGGGCG TCTATTGATC
AATCATGAGG CGCCGTTAAC GGGTGGCTTT GCCGGTGAGA TCGCCGCGAC AATTCAAGAA
GAGTGTTTCT TATATCTTGA GTCGCCGATA GCGCGAGTGT GTGGTCTAGA TACGCCGTAT
CCTTTGATCC ACGAAAAAGA ATATATGCCA GATGCGTTAA AGACGTTTGA AGCGATTAAA
GCTTCGGTAA AATTTTAG
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| Protein sequence | MAQMNMLQAI NQALSSEMEA DKKMMVFGED VGHFGGVFRA TSGLQEKFGR ERCFNTPLTE
QGIAGFANGL ASNGMTAVAE IQFADYIFPA IDQIVNESAK FRYRSGNEFN VGGLTFRTPY
GGGIAGGHYH SQSPEAYFTQ TPGLKVVVPR NPEQAKGLLI ASIRDKNPVI FFEPKRLYRA
SVGEVPEGDH VIELGKAEVI KQGTDITLLG WGAQMEILEN AAEMAAKKGI SCEIIDLRTL
SPWDVDTVAA SVKKTGRLLI NHEAPLTGGF AGEIAATIQE ECFLYLESPI ARVCGLDTPY
PLIHEKEYMP DALKTFEAIK ASVKF
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