| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2231 |
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| Symbol | |
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| ID | 5662624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2702826 |
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| End bp | 2704157 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641236834 |
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| Product | recombination factor protein RarA |
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| Protein accession | YP_001502086 |
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| Protein GI | 157962052 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00515157 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTAGTT TCAGTTTTGA TTTCGCACCG GATTTTAGGC CCTTAGCCGC TAGGATGAGG
CCGGAAACAT TAGAGCAATA TATAGGTCAG ACTCATCTTT TAGGTGAGGG CAAACCCCTG
CGCCAAGCGC TTGAGGCAGG AAGAGCTCAC TCCATGATGT TCTGGGGCCC CCCCGGCACA
GGCAAAACTA CCTTAGCCGA GTTAGTGGCG CGTTATGCTA ATGCCCATGT TGAACGTATT
TCTGCGGTAA CATCGGGTGT AAAAGAGATC CGCAGCGCAA TTGAGCATGC TAAGAACGTG
GCTCAATCTC GTGGACAACG CACCTTGCTA TTTGTCGATG AGGTTCATCG TTTTAACAAG
AGTCAACAAG ATGCATTCTT GCCTTTCATC GAAGATGGCA CAGTCATTTT TATTGGCGCA
ACCACAGAAA ATCCATCATT TGAGATAAAC AACGCATTAT TATCCAGAGC TAGGGTTTAT
GTTATTAAAC AGCTTGAAGC GGATGAAATT GGGCAGATAG TCCAACAAGC GCTAAAAGAT
GAAGAGCGTG GCTTAGGTAA GCGTAAATTT CTGCTGCCAC CCGATGTAGC CTTAAAGCTT
GCTCAAACTT GTGACGGTGA TGCGCGTAAG GCGTTAAACC TTATCGAGCT AATGAGCGAT
ATGCTTAAAG ATGGTGAGGC CTTCACTGAA GAGATGATAG TGCAGGTAGC CGGGCAGCAA
CTTGCTGGCT TTGATAAGAA TGGCGATCAG TATTACGACT TGATTTCTGC CGTTCATAAG
TCGATTCGTG GTTCTGCTCC TGATGCGGCA CTATATTGGT ATTGTCGAAT GCTTGAGGGC
GGTTGTGACC CGCTTTATAT CGGTCGGCGT CTTTTAGCCA TCGCCTCAGA GGATATAGGT
AATGCCGATC CAATGGCGAT GACCGTCGCC GTTAATGCAT GGGAATGCTT TCATCGGGTG
GGGCCTTCGG AAGGTGAGCG TGCCATAGCA CAAGCTGTGT TGTACTTAGC GAGTGCACCT
AAGAGTAATG CGGTATATAC CGCTTTTGCG AAGGCAAGAC AGCTTGCCCG AGAAACGGGA
CACGAACCTG TACCTAAGCA TCTTTGTAAT GCACCGACTC AATTGATGCA AGAGATAGGC
AAAGGCGAAG GCTATCGTTA TGCTCATGAC GAACCTAATG CCTATGCAAG TGGCGAGAAA
TATTTGCCTC CATCTTTAAC CGAACAGCAA TTTTACTATC CAACAGAGCG TGGTTTTGAA
AAGCGTATTA AAGATAAACT GGCTCAGTTG AAGCTTCTTG ACGAACAAAG TGAGGAGAAA
AGATATGAAT AA
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| Protein sequence | MSSFSFDFAP DFRPLAARMR PETLEQYIGQ THLLGEGKPL RQALEAGRAH SMMFWGPPGT
GKTTLAELVA RYANAHVERI SAVTSGVKEI RSAIEHAKNV AQSRGQRTLL FVDEVHRFNK
SQQDAFLPFI EDGTVIFIGA TTENPSFEIN NALLSRARVY VIKQLEADEI GQIVQQALKD
EERGLGKRKF LLPPDVALKL AQTCDGDARK ALNLIELMSD MLKDGEAFTE EMIVQVAGQQ
LAGFDKNGDQ YYDLISAVHK SIRGSAPDAA LYWYCRMLEG GCDPLYIGRR LLAIASEDIG
NADPMAMTVA VNAWECFHRV GPSEGERAIA QAVLYLASAP KSNAVYTAFA KARQLARETG
HEPVPKHLCN APTQLMQEIG KGEGYRYAHD EPNAYASGEK YLPPSLTEQQ FYYPTERGFE
KRIKDKLAQL KLLDEQSEEK RYE
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