Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2229 |
Symbol | |
ID | 5662622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2701154 |
End bp | 2702440 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641236832 |
Product | seryl-tRNA synthetase |
Protein accession | YP_001502084 |
Protein GI | 157962050 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0252643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGATC CAAAATTTTT ACGCAGTGAA TTAGAAATGA CCGCCGAGCG CCTTGCGACT CGTGGTTTTA TTTTAGACGT TGAGCGTCTA AGCAAACTTG AAGAAACTCG CAAGTCTTTG CAGGTTGCAA CCGAAGAGCT ACAAGCGTCG CGTAACGCTA TCTCTAAGTC GATTGGCCAA GCTAAAGCTA AAGGCGAAGA TGTTGCACCT ATCATGGCTC AAGTTGGTTC CCTAGGCGAA GAGCTTGATG CTAAGAAGAC TGAATTAGCT GCACTACTTG AAGAGCTAAA CGCTATCGCA ATGAGCGTGC CGAACTTACC TGATGAGTCA GTACCAACGG GTGCAGATGA GTCTGAAAAC GTCGAAGTTC GCCGTTGGGG CACACCAAAA GAGTTCGATT TCGCAGTCAA AGATCATGTT GAACTTGGTG AAAATATTGG TGGTTTAGAC TTTAAAAACG CCGTGAAGAT TACAGGTTCG CGCTTTATCG TGATGAAGGG GCAAATTGCT CGCATGCACC GTGCTTTAGC ACAATTCATG TTAGACCTTC ATACAACAGA ACATGGTTAC ACTGAAGCGT ATGTACCTTT GCTAGTGAAT GAAGACAGTT TATTAGGAAC GGGTCAGTTA CCTAAATTTG GTGAAGACTT ATTTCATACC AAACCTGCGA CTGAAGAAGG CCAAGGTCTA AGTCTAATTC CAACAGCTGA AGTGCCACTG ACTAACTTAG TTCGTGACAC TATCGTTGAA GAAGATAATT TACCAATCAA ACTGACTGCA CATACACCTT GTTTTAGAAG TGAAGCGGGC TCTTATGGCC GTGATACTCG TGGTTTGATC CGCCAACATC AGTTTGACAA AGTTGAAATG GTTCAGCTTG TTAAGCCCGA AGATTCAATG CAGGCCTTAG AAGACTTAAC GGGCCATGCT GAAGTCGTTC TGCAGAAGCT AGGTCTACCA TACCGTACAA TGGTTTTATG TACTGGTGAC ATGGGCTTTG GCTCTGCGAA AACTTACGAC ATCGAAGTTT GGTTGCCAGC GCAGGATACT TACCGTGAGA TTTCATCTTG CAGTAACATG CAAGACTTCC AAGCGCGTCG TATGCAAGCG CGCTACAAAG GTAAAACTGA CAAGAAGCCA AGCTTACTAC ACACATTGAA TGGTTCAGGC TTAGCTGTTG GCCGTACGTT AGTGGCTGTA CTTGAAAACT ACCAGAATGC AGATGGTTCT ATCACAGTGC CAGAAGCATT ACGCGGTTAC ATGGGCGGCC TAAAAAAAAT CGGTTAA
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Protein sequence | MLDPKFLRSE LEMTAERLAT RGFILDVERL SKLEETRKSL QVATEELQAS RNAISKSIGQ AKAKGEDVAP IMAQVGSLGE ELDAKKTELA ALLEELNAIA MSVPNLPDES VPTGADESEN VEVRRWGTPK EFDFAVKDHV ELGENIGGLD FKNAVKITGS RFIVMKGQIA RMHRALAQFM LDLHTTEHGY TEAYVPLLVN EDSLLGTGQL PKFGEDLFHT KPATEEGQGL SLIPTAEVPL TNLVRDTIVE EDNLPIKLTA HTPCFRSEAG SYGRDTRGLI RQHQFDKVEM VQLVKPEDSM QALEDLTGHA EVVLQKLGLP YRTMVLCTGD MGFGSAKTYD IEVWLPAQDT YREISSCSNM QDFQARRMQA RYKGKTDKKP SLLHTLNGSG LAVGRTLVAV LENYQNADGS ITVPEALRGY MGGLKKIG
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