| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2224 |
|---|
| Symbol | |
|---|
| ID | 5662617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 2696062 |
|---|
| End bp | 2696997 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641236827 |
|---|
| Product | C32 tRNA thiolase |
|---|
| Protein accession | YP_001502079 |
|---|
| Protein GI | 157962045 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00242897 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAG AATTAACTCC ACAACAAGTC ACTCGTATGA CTAAACTGCA GAAGCGTTTA
CGCACTGAAG TTGGCCGTGC AATTGGTGAT TACAACATGA TTGAAGAAGG TGACCGAGTT
ATGTGTTGCC TCTCGGGTGG CAAAGACAGC TACGCCATGC TCGATATCTT GTTGAACCTT
CAGCAACGCG CTCCTATTAA ATTCGAAATC GTTGCGGTTA ACTTAGATCA GAAGCAACCC
GGTTTCCCTG AAGATATTCT GCCAGCATAC TTAGATACTT TAGGCGTGGC TTACCATATC
CTAGAAAAAG ATACTTACTC TATCGTTAAA GATAAGATCC CAGAAGGCAA GACTACCTGC
TCACTATGCT CGCGCCTACG CCGCGGTACC TTATATGGCT TTGCGCAAAA GATTGGTGCG
ACCAAAATTG CTCTAGGCCA TCATAGAGAT GACATCATCG AGACCATGTT CTTGAATATG
TTCTTTGCCG GTAAGATGAA GGCAATGCCA CCTAAGTTAC TATCAGATGA CGGTGCCAAC
ATGGTTATTC GCCCGTTAGC CTATGCTCGC GAAAAAGATA TTGCTGAGTA TGCAGCGCTT
AAAGGCTTCC CAATTATTCC TTGTAACCTT TGTGGGTCAC AAGAAAACCT CAAACGTGCA
GCAGTCAAAG AGATGTTAGT ACAGTGGGAC AAGCAGCATC CAGGTCGTAT TGAAACCATC
TTCACTGCGA TGCAAAATAC TGCCCCATCA CAGGGTGTAG ACAGAGAGCA GTTTGACTTC
TTATCACTGC AGCGTGACCC AGATGCGCCA ATGAGTGGTC AAGTTGCCGA ATCTGATCTG
CCTGCATTCG ATTTCGTTGA TGTATCGAAT AACGGTCATA TCAACCTTGA TGCCGCTGCG
CGAATCGATG TTGTCAGTAC TTATACGCCA GAATAG
|
|---|
| Protein sequence | MSEELTPQQV TRMTKLQKRL RTEVGRAIGD YNMIEEGDRV MCCLSGGKDS YAMLDILLNL
QQRAPIKFEI VAVNLDQKQP GFPEDILPAY LDTLGVAYHI LEKDTYSIVK DKIPEGKTTC
SLCSRLRRGT LYGFAQKIGA TKIALGHHRD DIIETMFLNM FFAGKMKAMP PKLLSDDGAN
MVIRPLAYAR EKDIAEYAAL KGFPIIPCNL CGSQENLKRA AVKEMLVQWD KQHPGRIETI
FTAMQNTAPS QGVDREQFDF LSLQRDPDAP MSGQVAESDL PAFDFVDVSN NGHINLDAAA
RIDVVSTYTP E
|
|---|
| |