Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2223 |
Symbol | |
ID | 5662616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2695050 |
End bp | 2695982 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641236826 |
Product | universal stress protein UspE |
Protein accession | YP_001502078 |
Protein GI | 157962044 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0502569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGACT ATCAGAAACT CCTTGTGGTT GTCGACCCAA CGACAGAAAA ACAGGCGGCT CTAGCAAGAG CCGTTGAACT CGCCTCAGAA AGCAAAGCCG AAATTACGGT CTTTTTATCG ATTTTCGACT TCTCCTACGA GATGACCTCA ATTCTTTCCG GTCAAGAAAG AGAAGCGATG CGGGAAGGTG TCATTAACCA GCGTAAAGCT TGGATAGATG ACATTATAAA ACCTTATTGT AAAGATGGCA TAAAAGTCAC ATCTGAAGTT ATCTGGCATA ACCGCCCTTT CGAAAGCATT ATCAGACAGG CAATTGACGG TAACTACGAC CTTATCGTTA AGGGTACTCA CGAGCACGAT AAGCTTAAGT CGGTAATATT CACACCGACA GACTGGCATC TTATGCGAAA AGCCCCTATC CCAGTGCTGC TAGTTAAAGA ACATGACTGG CCTGTAGCGG GTAAGATAGT TTGCGCCATT AACGTCAGTG CAGAAGACGA CGCAAATGAG ACGCTTAATG GTAAAATTAT CACTCACGCC AGCAAACTCG CTAAGCAATT TAATGCTCAG GTACATCTAG TTAATGGTTA CCCTGGCACT CCTGTTAATT TAGCCATAGA GCTGCCTGAT TTCGATGCCC ACACTTACAG TGAAACCATT AGGCTTCAAC ACGAAGAACG AATTTGCTAT CTAGCAAATG CCTACGGGAT CTCTCCTGAC TTTTGTCATG TAAAAGAAGG CTTACCAGAA GATGTCATCC CCGATTTAGC CGCTGAGTTA GATGCAGAGC TAGTGATTTT AGGCACGGTA GGCAGAACCG GACTTTCTGC TGCATTAATC GGTAATACGG CAGAGCATGT CATCGACAGT ATCAACTGTG ACTTATTGGC GATAAAACCT GATGGTTATA AATCACCATT AGAAGAGGTC TAA
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Protein sequence | MMDYQKLLVV VDPTTEKQAA LARAVELASE SKAEITVFLS IFDFSYEMTS ILSGQEREAM REGVINQRKA WIDDIIKPYC KDGIKVTSEV IWHNRPFESI IRQAIDGNYD LIVKGTHEHD KLKSVIFTPT DWHLMRKAPI PVLLVKEHDW PVAGKIVCAI NVSAEDDANE TLNGKIITHA SKLAKQFNAQ VHLVNGYPGT PVNLAIELPD FDAHTYSETI RLQHEERICY LANAYGISPD FCHVKEGLPE DVIPDLAAEL DAELVILGTV GRTGLSAALI GNTAEHVIDS INCDLLAIKP DGYKSPLEEV
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