Gene Spea_2223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2223 
Symbol 
ID5662616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2695050 
End bp2695982 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content44% 
IMG OID641236826 
Productuniversal stress protein UspE 
Protein accessionYP_001502078 
Protein GI157962044 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0502569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGACT ATCAGAAACT CCTTGTGGTT GTCGACCCAA CGACAGAAAA ACAGGCGGCT 
CTAGCAAGAG CCGTTGAACT CGCCTCAGAA AGCAAAGCCG AAATTACGGT CTTTTTATCG
ATTTTCGACT TCTCCTACGA GATGACCTCA ATTCTTTCCG GTCAAGAAAG AGAAGCGATG
CGGGAAGGTG TCATTAACCA GCGTAAAGCT TGGATAGATG ACATTATAAA ACCTTATTGT
AAAGATGGCA TAAAAGTCAC ATCTGAAGTT ATCTGGCATA ACCGCCCTTT CGAAAGCATT
ATCAGACAGG CAATTGACGG TAACTACGAC CTTATCGTTA AGGGTACTCA CGAGCACGAT
AAGCTTAAGT CGGTAATATT CACACCGACA GACTGGCATC TTATGCGAAA AGCCCCTATC
CCAGTGCTGC TAGTTAAAGA ACATGACTGG CCTGTAGCGG GTAAGATAGT TTGCGCCATT
AACGTCAGTG CAGAAGACGA CGCAAATGAG ACGCTTAATG GTAAAATTAT CACTCACGCC
AGCAAACTCG CTAAGCAATT TAATGCTCAG GTACATCTAG TTAATGGTTA CCCTGGCACT
CCTGTTAATT TAGCCATAGA GCTGCCTGAT TTCGATGCCC ACACTTACAG TGAAACCATT
AGGCTTCAAC ACGAAGAACG AATTTGCTAT CTAGCAAATG CCTACGGGAT CTCTCCTGAC
TTTTGTCATG TAAAAGAAGG CTTACCAGAA GATGTCATCC CCGATTTAGC CGCTGAGTTA
GATGCAGAGC TAGTGATTTT AGGCACGGTA GGCAGAACCG GACTTTCTGC TGCATTAATC
GGTAATACGG CAGAGCATGT CATCGACAGT ATCAACTGTG ACTTATTGGC GATAAAACCT
GATGGTTATA AATCACCATT AGAAGAGGTC TAA
 
Protein sequence
MMDYQKLLVV VDPTTEKQAA LARAVELASE SKAEITVFLS IFDFSYEMTS ILSGQEREAM 
REGVINQRKA WIDDIIKPYC KDGIKVTSEV IWHNRPFESI IRQAIDGNYD LIVKGTHEHD
KLKSVIFTPT DWHLMRKAPI PVLLVKEHDW PVAGKIVCAI NVSAEDDANE TLNGKIITHA
SKLAKQFNAQ VHLVNGYPGT PVNLAIELPD FDAHTYSETI RLQHEERICY LANAYGISPD
FCHVKEGLPE DVIPDLAAEL DAELVILGTV GRTGLSAALI GNTAEHVIDS INCDLLAIKP
DGYKSPLEEV