Gene Spea_2221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2221 
Symbol 
ID5662614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp2693454 
End bp2694146 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content50% 
IMG OID641236824 
Producthypothetical protein 
Protein accessionYP_001502076 
Protein GI157962042 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.157963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGATT TCAGCCTAAT TGGGGCATTT ATCGTCGGCG TAATGGGCGC GGGACACTGT 
ATTGGTATGT GCGGTGGCCT TGTCGGGGCA TTATCGGCTA ACTTACCCAA GAATAGTGGC 
GCTAATGCTC TGGTATCCCA ACTAGGTTAC CTGCTGAGTT ACAACAGCGG TCGTATCATC 
AGTTACGCCA CTGCCGGTGC GTTAATTGGT GGCAGTGCCA GTGCCCTTGG AGTCTTGTTC 
GATGCCGACT CCTATTTACT GGTTTTGCGC ATTTTTGCTG GCCTTATGAT GATCATCACC 
GGGCTTTACA TCGCACAACT CTGGGCTGGC GTGGTTCAGA TTGAGCGTAT TGGAAAATTA 
CTGTGGCAAT ATATCGCCCC AATTGCCAAT AAATTCATTC CGATAAAAAA CCGCTCCCAC 
GCCTTTATTG CTGGTGCGCT TTGGGGCTGG CTCCCTTGTG GTCTGGTTTA TAGCATGTTG 
ACCTGGGCTG TTGCTGCGGG GAACCCGCTT GAAGGCGCTC TTATCATGCT TTGCTTCGGC 
CTAGGCACAT TACCCGCATT ATTAAGCGCA GGTATTGCAG CAAGCAGCTT TAGCCGCTGG 
GTGCAGAAGA AAACAGTACG AATAATAAGC GGACTGGCGT TAATCGGTTT CGGAGTACAA 
ACCTTGTACG TGGCGATTAA CCAGCTTAAC TAG
 
Protein sequence
MNDFSLIGAF IVGVMGAGHC IGMCGGLVGA LSANLPKNSG ANALVSQLGY LLSYNSGRII 
SYATAGALIG GSASALGVLF DADSYLLVLR IFAGLMMIIT GLYIAQLWAG VVQIERIGKL 
LWQYIAPIAN KFIPIKNRSH AFIAGALWGW LPCGLVYSML TWAVAAGNPL EGALIMLCFG 
LGTLPALLSA GIAASSFSRW VQKKTVRIIS GLALIGFGVQ TLYVAINQLN