| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2215 |
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| Symbol | |
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| ID | 5662608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2688412 |
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| End bp | 2689026 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641236818 |
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| Product | cbb3-type cytochrome c oxidase subunit II |
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| Protein accession | YP_001502070 |
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| Protein GI | 157962036 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
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| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000527823 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTTA ATCATGAGAT AGTTGAGAAA AACATCGGTC TATTAGGGAT CCTCACTGTT
GTCGCAATCA GCTTTGGTAG CTTGGTTGAG ATCACACCCC TTTTGTTCCA GGAAGACACT
ACTGAGCCAT TAGAAGGTCA AATCCCTTAT ACGGCTATGC AGATTGAAGG TCGTGATATC
TATGTTCGTG AGGGCTGTTA TGGCTGTCAC AGCCAGATGA TCCGTCCACT GCGTGCTGAA
ACTGAACGTT ACGGTCACTA TTCAGTGGCT GGTGAGTCAG TTTGGGATCA CCCATTCCAG
TGGGGCTCTA AGCGTACCGG TCCAGATTTA GCCCGTGTTG GCGGTCGTTA CAGTGACAAA
TGGCATGAGG TTCACTTAAT CGACCCTCGC GCCGTGGTAC CGCAGTCAAA TATGCCTGCT
TACCCTTGGT TAGCTGAGAA CACTTTAACC GGTGAACTTA CTGGCCAGAA GATGCAAATC
CTGCAAAATC TTCACCCTAC TCATCAGATG TACACCGCTG AAGAGATTGA TGGCGCTAAA
GACGCTGTTA AAGGTAAGAC TGAGTTGGAT GCATTGGTCG CATATCTGCA ATCACTAGGC
CACGCGCTTA AATAA
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| Protein sequence | MKFNHEIVEK NIGLLGILTV VAISFGSLVE ITPLLFQEDT TEPLEGQIPY TAMQIEGRDI
YVREGCYGCH SQMIRPLRAE TERYGHYSVA GESVWDHPFQ WGSKRTGPDL ARVGGRYSDK
WHEVHLIDPR AVVPQSNMPA YPWLAENTLT GELTGQKMQI LQNLHPTHQM YTAEEIDGAK
DAVKGKTELD ALVAYLQSLG HALK
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