| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2214 |
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| Symbol | |
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| ID | 5662607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2686963 |
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| End bp | 2688399 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236817 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_001502069 |
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| Protein GI | 157962035 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000208976 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAACC ATTCCCAGCC TCAAGGCGCT GATTACAACT ACACCATCGT CCGTCAATTC
GCTCTAACAA CTGTGTTATG GGGAATTGTT GGCATGTCGG TAGGTGTACT AATTGCAGCT
CAGTTAATCT GGCCGCAGCT AAACTTCGAA ACTTCATGGT TAACGTATAG TCGTCTACGA
CCTCTACATA CGAATGCCGT GATTTTCGCG TTTGGTACCT CAGCCCTTTT CGCCACATCC
TATTATATCG TTCAACGCAC CTGTCAAACT CGACTATTTG CACCTAAGTT AGCCGCATTT
ACGTTCTGGG GTTGGCAAGC CATCATTCTT TCGGCAGCAA TTAGTTTGCC ACTTGGTATT
ACCAGTGGTA AAGAATACGC CGAATTAGAA TGGCCAATTG ATATCGCAAT TACCGTCGTA
TGGGTCTCCT ATGCTGTGGT TTTCTTCGGT ACTATCATTA AACGAACCAC GTCGCATATC
TATGTGGCTA ACTGGTTCTT TGGTGCCTTT ATTATCACGG TAGCTGTACT TCACATAGTT
AACTCTATGG CTGTACCGTT AACTATGACT AAGTCTTACT CGCTATATAG TGGCGCTGTA
GATGCTATGG TCCAGTGGTG GTATGGTCAC AATGCGGTAG GCTTCCTGTT AACTGCAGGT
TTCTTAGGTA TGATGTACTA CTTCGTACCT AAGCAAGCTG GTCGTCCGGT TTATTCGTAC
CGCCTATCTA TCGTTCACTT CTGGGCACTT GTTGCTTTGT ATATCTGGGC TGGTCCTCAC
CACCTACACT ACACAGCACT TCCAGACTGG ACTCAGTCAC TTGGTATGGT GATGTCTCTA
ATCCTATTCG CTCCTTCTTG GGGTGGTATG ATTAACGGTA TCATGACGCT ATCGGGTGCA
TGGCACAAAC TTCGTACAGA CCCTATCTTG CGTTTCCTTG TTGTTTCATT GTCTTTCTAC
GGTATGTCTA CCTTCGAAGG CCCAATGATG GCAATTAAGA CGGTTAACGC ACTTTCTCAT
TACACTGACT GGACTGTTGG ACACGTTCAC TCTGGTGCAT TGGGTTGGGT TGCCATGGTT
TCTATCGGTT CTTTGTATCA CTTGATACCA GTTCTGTTTG GCCACGGCCG TATGTACAGC
ACAAACCTAA TTAACGTTCA CTTCTGGTTG GCAACAATCG GTACTGTTCT TTATATCGTT
TCAATGTGGA TCTCTGGTGT GATGCAGGGT CTAATGTGGC GCGCAGTTAA CTCTGACGGT
ACATTGACTT ATAGCTTTGT TGAAAGCTTA GAAGCCTCTT ACCCGTTCTA CTTTGTTCGT
TTCCTAGGTG GTGTATTCTT CCTTACAGGT ATGTTCATAA TGGCATACAA CGTACTGCGT
ACTGTTAAGG CCCCTAAAGA TTCTTTGCCA GCAATTGCTG ATGCAAAAGC AGCTTAA
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| Protein sequence | MMNHSQPQGA DYNYTIVRQF ALTTVLWGIV GMSVGVLIAA QLIWPQLNFE TSWLTYSRLR
PLHTNAVIFA FGTSALFATS YYIVQRTCQT RLFAPKLAAF TFWGWQAIIL SAAISLPLGI
TSGKEYAELE WPIDIAITVV WVSYAVVFFG TIIKRTTSHI YVANWFFGAF IITVAVLHIV
NSMAVPLTMT KSYSLYSGAV DAMVQWWYGH NAVGFLLTAG FLGMMYYFVP KQAGRPVYSY
RLSIVHFWAL VALYIWAGPH HLHYTALPDW TQSLGMVMSL ILFAPSWGGM INGIMTLSGA
WHKLRTDPIL RFLVVSLSFY GMSTFEGPMM AIKTVNALSH YTDWTVGHVH SGALGWVAMV
SIGSLYHLIP VLFGHGRMYS TNLINVHFWL ATIGTVLYIV SMWISGVMQG LMWRAVNSDG
TLTYSFVESL EASYPFYFVR FLGGVFFLTG MFIMAYNVLR TVKAPKDSLP AIADAKAA
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