| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2197 |
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| Symbol | |
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| ID | 5662590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2666018 |
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| End bp | 2667334 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641236800 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001502052 |
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| Protein GI | 157962018 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.757416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAATG ATATGACAAG AAGATGTGCG CTCAGCATTT GTTTATCTTT TATTGTTTCT
ATATGTATAG TTAATTTATT CTTGACTGTT AATAAAGGTA AGTTGAATAG TAAGTTTTTA
ACTAACATCC TTTTTATTAG TGATGCAATA TACCGTTTTA ATGTAAACAG CCTTAACAGT
AAGTACATTT CTCTACCATC AAATGATTTA AAACAGGGGG TCATAGTAAA AAATTCTGAA
GCTAAAAAAA TTCGAGACCT ATCTGAACAT ATAGATAATC TATTTGCTGT ATTGAAAATC
AATCCAATCA TATCTAGCAA CTTATGGACG GTCGCGAATG TATACCCAGA GTATGTCATT
CCAAGGCCGT TTAGAGAGGA GTACATAAAC CTTTTTGATA AGGATTTTGC TGAGGAAAAC
TACCTAGAAC GTATTTTAAA ATTAGAAAAT ATTGAAGAAA CACTAGAAGG AAGTGGTTTA
ACTGTATTTG AAACAGTGAG AGTTTTCGGT CCTTATATAG AAGAGGGAAC CAATGAAGAG
TTATTTTCAA TTTATTACCC ACTATATTTA GAAGGCGTTG TTTTTTCTGT TTTAGTTATT
GATGTAAAAA GTAATTTTTT AAATGATTTC ATAGAAAATT TTAATGATGA AGAATTTACT
TGGTTTGAAA TGTCAGATAA AGACCGTCAA AACATCAGTA CGATTATATA CGAATCCTTA
GCACTTAAGA CCGAAGATAG AAAAGTGGGC CTAACAATAA AAACACCTAC ACTGTACAAC
TCTATTGCCA TTTTAATATG TACGCTAATC ATACACGGCT GTTTTTTAAT TGCTGCATAC
ATTAGAAAGT TTTATGTCGA AAGCAGCATA GATAGGTTAT CAGGCTTCTA TCGAAAAGAT
GGTTTTATGA GTAAAAAAAT GTCTGTTAAC TCTATGTGCC TAATTGATAT CGATCACTTT
AAGAAAATCA ATGATACATA TGGACACGTT GTTGGTGACA TTGTGATTGC AGAAGTGGCT
AATCGAATAA AAAACTCCAT GCGCTCAACT GATCTCGCTA TCCGCTGGGG TGGCGAAGAG
TTTGTGGTTA TTTTTAATGG TGAACTGTCT TTCGAGCAAT TCAATAGCAA AGCCAATGGT
TTATTGAGCA CGATAAATAG TGAAACCATC AATGATATAG CCGTCACTAT ATCTATAGGT
GCTATTTACT CCCAGTCTGA AATGAAATTG CAGGAAGCAT TTCATCTTTC TGACGAAGCT
CTTTATGAGT CGAAGAACTC TGGACGAAAT AAAGTCACTA TTCATCGTCA TAGCTGA
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| Protein sequence | MLNDMTRRCA LSICLSFIVS ICIVNLFLTV NKGKLNSKFL TNILFISDAI YRFNVNSLNS
KYISLPSNDL KQGVIVKNSE AKKIRDLSEH IDNLFAVLKI NPIISSNLWT VANVYPEYVI
PRPFREEYIN LFDKDFAEEN YLERILKLEN IEETLEGSGL TVFETVRVFG PYIEEGTNEE
LFSIYYPLYL EGVVFSVLVI DVKSNFLNDF IENFNDEEFT WFEMSDKDRQ NISTIIYESL
ALKTEDRKVG LTIKTPTLYN SIAILICTLI IHGCFLIAAY IRKFYVESSI DRLSGFYRKD
GFMSKKMSVN SMCLIDIDHF KKINDTYGHV VGDIVIAEVA NRIKNSMRST DLAIRWGGEE
FVVIFNGELS FEQFNSKANG LLSTINSETI NDIAVTISIG AIYSQSEMKL QEAFHLSDEA
LYESKNSGRN KVTIHRHS
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