| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2188 |
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| Symbol | codB |
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| ID | 5662581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2652703 |
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| End bp | 2653968 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236791 |
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| Product | cytosine permease |
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| Protein accession | YP_001502043 |
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| Protein GI | 157962009 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1457] Purine-cytosine permease and related proteins |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAGCG ATAATAATTA CAGTTTAAGT CCGGTTCCTC AATCGGGCCG TAAAGGTGTT
TTCTCTCTGA CGATGGTGAT GCTGGGATTA ACCTTTTTTT CAGCAAGTAT GTGGACGGGA
GGAACGCTCG GCACAGGCCT CTCTTTTAAT GATTTTGTTC TAGCAGTTCT TATTGGTAAT
TTAATTCTCG GTATCTATAC TTCATTTCTT GGTTACATCG GCGCTCAAAC AGGCCTCTCT
ACTCATCTCC TCGCGCGTTA CTCATTCGGT TTAAAAGGTT CTTGGCTACC CTCGCTACTT
CTCGGTGGCA CGCAAGTTGG TTGGTTTGGT GTTGGCGTGG CAATGTTTGC TATTCCGGTA
CAGAAAGCCA CAGGTATAGA TACCAACCTG CTGATTATTG TCTCGGGTCT ACTGATGACC
TTTACCGTGT ACTTCGGTAT TGGCGCGATT ATGATTTTGT CAGCCATCGC GGTTCCAGCC
ATCGCCCTAT TTGGCGGATT CTCGGTACTA CAAGCGGTCG ACACTATGGG CGGCATGCAA
GGCTTAATGG CGGTCGAGCC TGAAAATCCA ATCGATTTTA ATACCGCTCT GGTATTGGTT
GTCGGCTCAT TTATCTCAGC CGGTACACTG ACCGCAGATT TTGTTCGCTT CGGTAAAAAT
CCTAAAACTG CCGTGTTTGT CACCATGTTT GCCTTCTTCG TCGGTAATTC GTTGATGTTT
ATCTTCGGCG CAGCGGGCGC TGCGGCAACG GGGCAAGCTG ATATCTCTGA GGTTATGATT
GCTCAGGGAC TATTAATCCC AGCCATTATC ATCTTGGGTC TTAATATTTG GACCACCAAT
GATAATGCGC TGTATGCTTC GGGCTTAGGC TTTTCAAACA TTACCGGCTT GCCGAGTAAG
TACCTGTCAA TTTTTAACGG CGTGATCGGC ACTCTGTGCG CGCTATGGCT ATATAATAAC
TTTGTCGGTT GGTTAACCTT CCTATCGGCA GCTATCCCAC CTATTGGTGG CATTATCATC
GCCGATTACT TACGTAACCG TGAAAAATAT AAAGACTTCG CCAATGCTAA GTTTTCAACG
GTAAATTGGG CTGCGATTAG CGGTGTCGTG ATAGGCGTGC TAGCAGGCCA CCTATTACCA
GGCATAGTGC CAATTAATGC CGTACTTGCG GGTGCCATCA GCTATTTATT AATAGATGAA
GCGCTAAAAC GCATGAATAA ACAAAAATTA GTTAAATCAG ATTGTAAAAA TGCTACCAAT
GCATAA
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| Protein sequence | MASDNNYSLS PVPQSGRKGV FSLTMVMLGL TFFSASMWTG GTLGTGLSFN DFVLAVLIGN
LILGIYTSFL GYIGAQTGLS THLLARYSFG LKGSWLPSLL LGGTQVGWFG VGVAMFAIPV
QKATGIDTNL LIIVSGLLMT FTVYFGIGAI MILSAIAVPA IALFGGFSVL QAVDTMGGMQ
GLMAVEPENP IDFNTALVLV VGSFISAGTL TADFVRFGKN PKTAVFVTMF AFFVGNSLMF
IFGAAGAAAT GQADISEVMI AQGLLIPAII ILGLNIWTTN DNALYASGLG FSNITGLPSK
YLSIFNGVIG TLCALWLYNN FVGWLTFLSA AIPPIGGIII ADYLRNREKY KDFANAKFST
VNWAAISGVV IGVLAGHLLP GIVPINAVLA GAISYLLIDE ALKRMNKQKL VKSDCKNATN
A
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