Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2173 |
Symbol | |
ID | 5662566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2630610 |
End bp | 2631374 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641236776 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001502028 |
Protein GI | 157961994 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGAC GTTTAATTGG AAAGGTTGCC TTAATTACCG GGGCAGCCCG AGGTGTTGGT TTAGCAACTG CGAGATTAAT GGCAAGGGAA GGAGCCCAAG TTGTTCTCAC CGATATAAAT GCTGAACAAG GGAAAGAGAT AGCAAATAGT ATTGGTAATA ATAGCTTGTT CATAGAACAT GATGTCACTA AAGAGGCTGA TTGGTCTGCT GTTATCAATC ATATTGAAGC TAAATTTGGC CAATTAAATA TTCTGCTCAA TAACGCCGCA ATCTTGCAAC TTGGTGACAT CAAAGAAGAA ACGTTGGCAG GATGGCAGAG AGTGCACATG GTTAATTCAG ACAGTGTTTT TCTTAGGATC CACTATGCTT TGCCGCTAAT GGAAAAAAGT GGCGGTGGTT CAATTATCAA TATGTCCTCT TCATCAGCCG TTTTCGGTAT GCCACATTTT GCAGCCTATG GTGCGAGTAA AGCCGCTATT CGTGGACTGT CTCAAAGTGT TGCGGTTTAT TGTTCGCAGA CCAAAAATAA CGTTAGGTGC AACACCTTGC ATCCGGATTC AATTATGACA CCTATGGTTA TGGAGATAAG TGCACAAGCA GGTGATCGCA GCTTAGCAGA TCCTGATCGT GCTAAGGCTT ATGTATGCCG TCCTGAAGAC GTCGCTAATA GTGTTTTATT TCTAGCGTCC GATGAATCAA AACATATTAA TGGTGCCGCT ATTGCGCTAG ACGGTGGGGC GACAGTAACT CCTCCTTATA TTTAA
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Protein sequence | MSGRLIGKVA LITGAARGVG LATARLMARE GAQVVLTDIN AEQGKEIANS IGNNSLFIEH DVTKEADWSA VINHIEAKFG QLNILLNNAA ILQLGDIKEE TLAGWQRVHM VNSDSVFLRI HYALPLMEKS GGGSIINMSS SSAVFGMPHF AAYGASKAAI RGLSQSVAVY CSQTKNNVRC NTLHPDSIMT PMVMEISAQA GDRSLADPDR AKAYVCRPED VANSVLFLAS DESKHINGAA IALDGGATVT PPYI
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